MTR_1g007370 (Medicago truncatula)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 MTR_1g007370 T323877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES58700 Sigma 70 320 390
KEH39719 Sigma 70 320 390

Links

Other Sigma 70 family TFs
Other Medicago truncatula TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_14896 Cicer arietinum Ca_14896 N 0.972
GLYMA17G26620 Glycine max GLYMA17G26620 N 0.859
cassava18263.valid.m1 Manihot esculenta cassava18263.valid.m1 N 0.831
PK05603.1 Cannabis sativa PK05603.1 N 0.817
29794.m003368 Ricinus communis 29794.m003368 N 0.803
GLYMA14G22170 Glycine max GLYMA14G22170 N 0.789
TCM_037242 Theobroma cacao TCM_037242 N 0.789
SIGC Vitis vinifera VIT_04s0008g00600 N 0.789
Gorai.010G103500 Gossypium raimondii Gorai.010G103500 N 0.789
PRUPE_ppa003696mg Prunus persica PRUPE_ppa003696mg N 0.775
gene09028-v1.0-hybrid Fragaria vesca gene09028-v1.0-hybrid N 0.775
SIGC Arabidopsis lyrata Al_scaffold_0005_2291 N 0.761
SIGC Arabidopsis thaliana AT3G53920 N 0.761
Pm005208 Prunus mume Pm005208 N 0.761
Bostr.11793s0002 Boechera stricta Bostr.11793s0002 N 0.761
Eucgr.C00620 Eucalyptus grandis Eucgr.C00620 N 0.761
SapurV1A.0890s0100 Salix purpurea SapurV1A.0890s0100 N 0.761
Bo4g120510 Brassica oleracea Bo4g120510 N 0.746
Bra014857 Brassica rapa Bra014857 N 0.732
mgf012819m Mimulus guttatus mgf012819m N 0.732
Cagra.2252s0020 Capsella grandiflora Cagra.2252s0020 N 0.732
Carubv10016920m.g Capsella rubella Carubv10016920m.g N 0.732
Ciclev10007968m.g Citrus clementina Ciclev10007968m.g N 0.732
MDP0000135483 Malus domestica MDP0000135483 N 0.732
MDP0000315125 Malus domestica MDP0000315125 N 0.732
orange1.1g009449m.g Citrus sinensis orange1.1g009449m.g N 0.732
Thhalv10010251m.g Eutrema salsugineum Thhalv10010251m.g N 0.732
AMTR_s00056p00209700 Amborella trichopoda AMTR_s00056p00209700 N 0.718
PGSC0003DMG400025465 Solanum tuberosum PGSC0003DMG400025465 N 0.718
Solyc08g065970.2 Solanum lycopersicum Solyc08g065970.2 N 0.718
GSMUA_Achr4G01060_001 Musa acuminata GSMUA_Achr4G01060_001 N 0.704
PDK_20s1533271g001 Phoenix dactylifera PDK_20s1533271g001 N 0.704