CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Solyc04g005600.1 *(Solanum lycopersicum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	Solyc04g005600.1	T280091_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB106 M11040_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AT3G01140_01	0.741	0.774
MYB39 M07106_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_col_a	0.703	0.699
MYB39 M07107_2.00	Arabidopsis thaliana	NYYYACCWAMYWHHHHHHHNH	DNDDDDDDDWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_colamp_a	0.703	0.699
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Solyc04g005600.1.1	Myb	14	61	KGPWTHDEDQKLLAYVDEHGYGSWSDLPLRAGLQRCGRSCRLRWINYL
Solyc04g005600.1.1	Myb	67	112	RGKFSSEEERTIFQLHALLGNRWSIIASHLPNRSDNEIKNYWNTRL

Links
Other Myb/SANT family TFs
Other *Solanum lycopersicum* TFs