Traes_2AL_660616C44 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_2AL_660616C44 T280864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.805 0.826
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.805 0.826
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.805 0.826
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.805 0.826
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.805 0.826
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.778 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.766 0.804
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.766 0.804
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.756 0.783
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.736 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.736 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.736 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.711 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.711 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2AL_660616C44.1 Myb 39 84

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava30062.valid.m1 Manihot esculenta cassava30062.valid.m1 N
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N
Cla005738 Citrullus lanatus Cla005738 N
Cucsa.320850 Cucumis sativus Cucsa.320850 N
evm.TU.supercontig_29.139 Carica papaya evm.TU.supercontig_29.139 N
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N
Gorai.003G170700 Gossypium raimondii Gorai.003G170700 N
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N
Lus10004353.g Linum usitatissimum Lus10004353.g N
Lus10028934.g Linum usitatissimum Lus10028934.g N
MDP0000275704 Malus domestica MDP0000275704 N
orange1.1g042460m.g Citrus sinensis orange1.1g042460m.g N
PK22905.1 Cannabis sativa PK22905.1 N
Pm023512 Prunus mume Pm023512 N
POPTR_0001s00480 Populus trichocarpa POPTR_0001s00480 N
POPTR_0003s11020 Populus trichocarpa POPTR_0003s11020 N
PRUPE_ppa001561mg Prunus persica PRUPE_ppa001561mg N
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N
TCM_015991 Theobroma cacao TCM_015991 N
VIT_02s0154g00400 Vitis vinifera VIT_02s0154g00400 N