CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2DS_3F5D36630
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_2DS_3F5D36630
T280954_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.728
0.796
RAX3
M11043_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.728
0.796
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2DS_3F5D36630.1
Myb
14
62
KGPWSPEEDAKLKEFMDKHGTGGNWIALPQKAGLRRCGKSCRLRWLNYL
Traes_2DS_3F5D36630.1
Myb
68
113
HGEFTEHEDRVICSMYASIGSRWSIIASQLPGRTDNDIKNYWNTKL
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
427 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29983.m003297
Ricinus communis
29983.m003297
I
Carubv10028391m.g
Capsella rubella
Carubv10028391m.g
I
cassava39895.m1
Manihot esculenta
cassava39895.m1
I
Ca_02034
Cicer arietinum
Ca_02034
I
Ca_12172
Cicer arietinum
Ca_12172
I
Ciclev10027184m.g
Citrus clementina
Ciclev10027184m.g
I
Eucgr.I00022
Eucalyptus grandis
Eucgr.I00022
I
gene14755-v1.0-hybrid
Fragaria vesca
gene14755-v1.0-hybrid
I
GLYMA20G35690
Glycine max
GLYMA20G35690
I
Gorai.012G046200
Gossypium raimondii
Gorai.012G046200
I
GRMZM2G069365
Zea mays
GRMZM2G069365
I
LPERR02G24020
Leersia perrieri
LPERR02G24020
I
MDP0000804580
Malus domestica
MDP0000804580
I
mgf024641m
Mimulus guttatus
mgf024641m
I
mgf026503m
Mimulus guttatus
mgf026503m
I
MLOC_18998
Hordeum vulgare
MLOC_18998
I
OGLUM02G30190
Oryza glumaepatula
OGLUM02G30190
I
OMERI02G28440
Oryza meridionalis
OMERI02G28440
I
OPUNC02G27120
Oryza punctata
OPUNC02G27120
I
ZHD7
Oryza sativa
OS02G0706600
D
Pavir.Aa00802
Panicum virgatum
Pavir.Aa00802
I
Pavir.Ab02855
Panicum virgatum
Pavir.Ab02855
I
Pavir.J22932
Panicum virgatum
Pavir.J22932
N
POPTR_0004s14270
Populus trichocarpa
POPTR_0004s14270
I
PRUPE_ppa020272mg
Prunus persica
PRUPE_ppa020272mg
I
Q0DYA2_ORYSJ
Oryza sativa
Q0DYA2_ORYSJ
I
SapurV1A.0185s0100
Salix purpurea
SapurV1A.0185s0100
I
Sb04g030480
Sorghum bicolor
Sb04g030480
I
SELMODRAFT_49899
Selaginella moellendorffii
SELMODRAFT_49899
I
SELMODRAFT_59936
Selaginella moellendorffii
SELMODRAFT_59936
I
Si020227m.g
Setaria italica
Si020227m.g
I
TCM_001660
Theobroma cacao
TCM_001660
I
Traes_4AL_5659286D11
Triticum aestivum
Traes_4AL_5659286D11
N