Cla008304 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla008304 T283185_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla008304 Myb 130 176
Cla008304 Myb 182 227

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29681.m001315 Ricinus communis 29681.m001315 N 0.829
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.696
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.711
MYB64 Arabidopsis thaliana AT5G11050 N 0.740
Bo2g028290 Brassica oleracea Bo2g028290 I 0.740
Bo3g018490 Brassica oleracea Bo3g018490 I 0.744
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.769
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.708
Bra006744 Brassica rapa Bra006744 I 0.744
Bra020346 Brassica rapa Bra020346 I 0.735
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.735
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.736
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.736
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.735
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.704
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.800
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.829
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.719
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.806
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.803
Cla019490 Citrullus lanatus Cla019490 I 0.688
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.885
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.691
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.662
Eucgr.J01929 Eucalyptus grandis Eucgr.J01929 N 0.681
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.758
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.669
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.735
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.735
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.731
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.758
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.707
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.777
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.707
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.767
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.802
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.800
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.682
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.800
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.689
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.685
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N 0.666
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.691
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.756
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.752
MDP0000215359 Malus domestica MDP0000215359 I 0.682
MDP0000319656 Malus domestica MDP0000319656 I 0.800
mgf024290m Mimulus guttatus mgf024290m I 0.669
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.794
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.777
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.803
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.699
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.761
Pm000541 Prunus mume Pm000541 I 0.803
Pm024743 Prunus mume Pm024743 I 0.707
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.825
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.806
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.706
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.673
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.803
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.707
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.771
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.679
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.795
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.673
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.686
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.761
TCM_012087 Theobroma cacao TCM_012087 I 0.682
TCM_041651 Theobroma cacao TCM_041651 N 0.778
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.769
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.725
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.769
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.707