Ciclev10030254m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10030254m.g T286669_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10030254m Myb 164 210
Ciclev10030254m Myb 216 261

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.909
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.825
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.814
29681.m001315 Ricinus communis 29681.m001315 N 0.814
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.814
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.808
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.808
Cla008304 Citrullus lanatus Cla008304 N 0.803
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.803
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.802
Pm000541 Prunus mume Pm000541 I 0.802
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.800
MDP0000319656 Malus domestica MDP0000319656 I 0.799
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.798
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.790
TCM_041651 Theobroma cacao TCM_041651 N 0.787
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.782
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.782
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.781
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.760
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.758
Bo3g018490 Brassica oleracea Bo3g018490 I 0.757
Bra006744 Brassica rapa Bra006744 I 0.757
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.756
MYB64 Arabidopsis thaliana AT5G11050 N 0.753
Bo2g028290 Brassica oleracea Bo2g028290 I 0.753
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.753
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.749
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.749
Bra020346 Brassica rapa Bra020346 I 0.748
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.746
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.744
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.739
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.738
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.738
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.738
Pm024743 Prunus mume Pm024743 I 0.738
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.738
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.736
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.735
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.735
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.730
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.730
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.729
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.729
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.727
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.727
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.727
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.727
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.726
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.723
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.721
Cla019490 Citrullus lanatus Cla019490 I 0.720
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.720
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.719
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.718
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.717
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.717
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.716
TCM_012087 Theobroma cacao TCM_012087 I 0.714
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.714
MDP0000215359 Malus domestica MDP0000215359 I 0.714
GSMUA_Achr8G02290_001 Musa acuminata GSMUA_Achr8G02290_001 N 0.712
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.704
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.704
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.693
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.693
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.690
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.690
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.686
mg025334m Mimulus guttatus mg025334m I 0.679
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.678
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.678
OB06G13860 Oryza brachyantha OB06G13860 I 0.678
OBART06G04170 Oryza barthii OBART06G04170 I 0.678
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.678
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.678
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.678
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.678
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.678
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.678
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.678
OS06G0162700 Oryza sativa OS06G0162700 I 0.678
Ca_17294 Cicer arietinum Ca_17294 I 0.676
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.673
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.672
mgf024290m Mimulus guttatus mgf024290m I 0.671
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.671
F775_22212 Aegilops tauschii F775_22212 I 0.669
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.669
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.669
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.669
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.669
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.669
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.668
Pavir.J25000 Panicum virgatum Pavir.J25000 I 0.667
30147.m013937 Ricinus communis 30147.m013937 I 0.666
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.666
Eucgr.J01929 Eucalyptus grandis Eucgr.J01929 N 0.666
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.664
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.664
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.661
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.661
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.661