cassava26674.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava26674.m1 T284133_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava26674.m1 Myb 134 180
cassava26674.m1 Myb 186 231

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29681.m001315 Ricinus communis 29681.m001315 N 0.909
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.718
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.762
MYB64 Arabidopsis thaliana AT5G11050 N 0.721
Bo2g028290 Brassica oleracea Bo2g028290 I 0.721
Bo3g018490 Brassica oleracea Bo3g018490 I 0.725
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.728
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.689
Bra006744 Brassica rapa Bra006744 I 0.725
Bra020346 Brassica rapa Bra020346 I 0.716
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.695
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.717
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.717
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.695
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.725
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.880
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.720
Ca_17294 Cicer arietinum Ca_17294 I 0.675
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.808
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.814
Cla008304 Citrullus lanatus Cla008304 N 0.829
Cla019490 Citrullus lanatus Cla019490 I 0.710
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.826
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.713
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.683
Eucgr.J01929 Eucalyptus grandis Eucgr.J01929 N 0.722
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.819
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.690
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.695
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.695
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.712
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.779
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.728
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.727
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.728
GLYMA05G08761 Glycine max GLYMA05G08761 N 0.669
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.717
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.671
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.832
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.671
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.851
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.704
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.851
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.740
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.706
GSMUA_Achr8G02290_001 Musa acuminata GSMUA_Achr8G02290_001 N 0.704
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N 0.686
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.712
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.816
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.812
MDP0000199939 Malus domestica MDP0000199939 I 0.680
MDP0000215359 Malus domestica MDP0000215359 I 0.704
MDP0000319656 Malus domestica MDP0000319656 I 0.821
mg025334m Mimulus guttatus mg025334m I 0.669
mgf023372m Mimulus guttatus mgf023372m I 0.663
mgf024290m Mimulus guttatus mgf024290m I 0.681
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.775
MTR_4g105660 Medicago truncatula MTR_4g105660 N 0.671
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.663
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.787
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.814
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.680
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.680
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.750
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.662
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.742
Pm000541 Prunus mume Pm000541 I 0.824
Pm024743 Prunus mume Pm024743 I 0.728
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.885
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.886
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.719
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.694
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.824
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.728
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.831
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.680
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.875
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.694
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.663
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.707
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.742
TCM_012087 Theobroma cacao TCM_012087 I 0.704
TCM_041651 Theobroma cacao TCM_041651 N 0.830
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.750
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.705
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.750
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.728