Cucsa.078210 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.078210 T284377_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.078210.1 Myb 1047 1097
Cucsa.078210.2 Myb 1036 1086

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001750 Ricinus communis 30204.m001750 N 0.844
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.781
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.789
EAF1B Arabidopsis thaliana AT3G24870 N 0.834
EAF1A Arabidopsis thaliana AT3G24880 N 0.834
BGIOSGA027556 Oryza indica BGIOSGA027556 N 0.678
Bo3g083740 Brassica oleracea Bo3g083740 N 0.803
Bo4g133290 Brassica oleracea Bo4g133290 N 0.723
Bo7g031610 Brassica oleracea Bo7g031610 N 0.814
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.856
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.782
Bra013238 Brassica rapa Bra013238 N 0.803
Bra032689 Brassica rapa Bra032689 N 0.723
BRADI2G14372 Brachypodium distachyon BRADI2G14372 N 0.708
BRADI2G41720 Brachypodium distachyon BRADI2G41720 N 0.685
Carubv10015863m.g Capsella rubella Carubv10015863m.g N 0.810
Carubv10016123m.g Capsella rubella Carubv10016123m.g N 0.757
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.898
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.876
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.847
Cla015187 Citrullus lanatus Cla015187 N 0.909
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.831
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.806
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.857
F775_03250 Aegilops tauschii F775_03250 N 0.685
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.856
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.898
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.844
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.898
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.844
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.888
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.867
Gorai.001G233800 Gossypium raimondii Gorai.001G233800 N 0.771
Gorai.004G226000 Gossypium raimondii Gorai.004G226000 N 0.843
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.898
GRMZM2G018048 Zea mays GRMZM2G018048 N 0.667
GRMZM2G350684 Zea mays GRMZM2G350684 N 0.667
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.778
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.831
LPERR11G18970 Leersia perrieri LPERR11G18970 N 0.685
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.864
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.864
MDP0000155726 Malus domestica MDP0000155726 N 0.898
MDP0000250529 Malus domestica MDP0000250529 N 0.898
MLOC_60761 Hordeum vulgare MLOC_60761 N 0.665
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.855
OB01G30180 Oryza brachyantha OB01G30180 N 0.678
OBART08G04660 Oryza barthii OBART08G04660 N 0.678
OGLUM08G04910 Oryza glumaepatula OGLUM08G04910 N 0.678
OLONG_015531 Oryza longistaminata OLONG_015531 N 0.678
OMERI08G04670 Oryza meridionalis OMERI08G04670 N 0.678
ONIVA08G04510 Oryza nivara ONIVA08G04510 N 0.678
OPUNC08G04510 Oryza punctata OPUNC08G04510 N 0.678
orange1.1g000147m.g Citrus sinensis orange1.1g000147m.g N 0.847
ORUFI08G05170 Oryza rufipogon ORUFI08G05170 N 0.678
OS08G0177300 Oryza sativa OS08G0177300 N 0.678
Pavir.J00429 Panicum virgatum Pavir.J00429 N 0.677
Pavir.J03231 Panicum virgatum Pavir.J03231 N 0.677
Pavir.J18859 Panicum virgatum Pavir.J18859 N 0.700
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N 0.800
PK23540.1 Cannabis sativa PK23540.1 N 0.857
Pm020347 Prunus mume Pm020347 N 0.874
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.876
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.884
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.874
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.876
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.898
Sb03g025920 Sorghum bicolor Sb03g025920 N 0.700
Si000015m.g Setaria italica Si000015m.g N 0.700
Si020947m.g Setaria italica Si020947m.g N 0.689
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.835
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.839
TCM_002924 Theobroma cacao TCM_002924 N 0.865
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.835
Traes_1DL_7773A9BFB Triticum aestivum Traes_1DL_7773A9BFB N 0.665
Traes_3AL_06889C77D Triticum aestivum Traes_3AL_06889C77D N 0.678
Traes_3DL_FC1A52B36 Triticum aestivum Traes_3DL_FC1A52B36 N 0.678
TRIUR3_17785 Triticum urartu TRIUR3_17785 N 0.665
TRIUR3_27363 Triticum urartu TRIUR3_27363 N 0.685
VIT_07s0005g06680 Vitis vinifera VIT_07s0005g06680 N 0.774