Carubv10016123m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10016123m.g T286354_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10016123m Myb 1039 1088

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10015863m.g Capsella rubella Carubv10015863m.g N 0.857
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.810
EAF1B Arabidopsis thaliana AT3G24870 N 0.788
EAF1A Arabidopsis thaliana AT3G24880 N 0.788
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.769
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.769
Bo7g031610 Brassica oleracea Bo7g031610 N 0.759
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.759
Cla015187 Citrullus lanatus Cla015187 N 0.757
Cucsa.078210 Cucumis sativus Cucsa.078210 N 0.757
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.755
orange1.1g000147m.g Citrus sinensis orange1.1g000147m.g N 0.755
Bo3g083740 Brassica oleracea Bo3g083740 N 0.746
Bra013238 Brassica rapa Bra013238 N 0.746
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.746
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.746
Pm020347 Prunus mume Pm020347 N 0.746
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.746
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.746
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.746
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.746
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.746
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.746
MDP0000155726 Malus domestica MDP0000155726 N 0.746
MDP0000250529 Malus domestica MDP0000250529 N 0.746
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.746
PK23540.1 Cannabis sativa PK23540.1 N 0.746
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.736
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.732
Gorai.004G226000 Gossypium raimondii Gorai.004G226000 N 0.732
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.731
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.724
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.724
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.724
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.724
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.720
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.716
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.713
TCM_002924 Theobroma cacao TCM_002924 N 0.713
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.706
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.696
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.693
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.693
30204.m001750 Ricinus communis 30204.m001750 N 0.693
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.680
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.679
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.672