Cucsa.311420 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.311420 T284510_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.820 0.899
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.796 0.871
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.795 0.863
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.795 0.863
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.779 0.885
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.682 0.806
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.665 0.748
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.311420.1 Myb 39 85
Cucsa.311420.1 Myb 91 137
Cucsa.311420.1 Myb 143 187

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011231 Aedes aegypti AAEL011231 I 0.000
AALB007603 Anopheles albimanus AALB007603 I 0.000
AARA005929 Anopheles arabiensis AARA005929 I 0.000
AATE013762 Anopheles atroparvus AATE013762 I 0.000
ACEP12797 Atta cephalotes ACEP12797 I 0.000
ACEP13260 Atta cephalotes ACEP13260 I 0.000
ACUA011505 Anopheles culicifacies ACUA011505 I 0.000
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I 0.000
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I 0.000
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I 0.000
ADIR005732 Anopheles dirus ADIR005732 I 0.000
AEPI004043 Anopheles epiroticus AEPI004043 I 0.000
AFAF014433 Anopheles farauti AFAF014433 I 0.000
AFUN003486 Anopheles funestus AFUN003486 I 0.000
AGAP010438 Anopheles gambiae AGAP010438 D 0.000
AGAP028221 Anopheles gambiae AGAP028221 I 0.000
AMEM014965 Anopheles merus AMEM014965 I 0.000
AMIN004996 Anopheles minimus AMIN004996 I 0.000
AQUA005997 Anopheles quadriannulatus AQUA005997 I 0.000
ASIS019127 Anopheles sinensis ASIS019127 I 0.000
Cflo_03603--XP_001120531.1_APIME Camponotus floridanus Cflo_03603--XP_001120531.1_APIME I 0.000
Cflo_03607--XP_395932.2_APIME Camponotus floridanus Cflo_03607--XP_395932.2_APIME I 0.000
CLEC007515 Cimex lectularius CLEC007515 I 0.000
CLEC025065 Cimex lectularius CLEC025065 I 0.000
DAPPUDRAFT_290668 Daphnia pulex DAPPUDRAFT_290668 I 0.000
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I 0.000
eg Drosophila melanogaster FBgn0000560 D 0.000
kni Drosophila melanogaster FBgn0001320 D 0.000
knrl Drosophila melanogaster FBgn0001323 D 0.000
kni Drosophila virilis FBgn0013118 I 0.000
kni Drosophila simulans FBgn0044187 I 0.000
kni Drosophila sechellia FBgn0044208 I 0.000
GA18381 Drosophila pseudoobscura FBgn0078384 I 0.000
GA18413 Drosophila pseudoobscura FBgn0078415 I 0.000
GA20312 Drosophila pseudoobscura FBgn0080307 I 0.000
GF24121 Drosophila ananassae FBgn0101115 I 0.000
GF24122 Drosophila ananassae FBgn0101116 I 0.000
GF25170 Drosophila ananassae FBgn0102162 I 0.000
GG13292 Drosophila erecta FBgn0105564 I 0.000
GG13294 Drosophila erecta FBgn0105566 I 0.000
GG16225 Drosophila erecta FBgn0108460 I 0.000
GH16373 Drosophila grimshawi FBgn0123844 I 0.000
GH16981 Drosophila grimshawi FBgn0124452 I 0.000
GI11566 Drosophila mojavensis FBgn0134326 I 0.000
GI11896 Drosophila mojavensis FBgn0134654 I 0.000
GI11900 Drosophila mojavensis FBgn0134658 I 0.000
GL12762 Drosophila persimilis FBgn0150368 I 0.000
GL12764 Drosophila persimilis FBgn0150370 I 0.000
GL24862 Drosophila persimilis FBgn0162450 I 0.000
GM22199 Drosophila sechellia FBgn0177069 I 0.000
GD12173 Drosophila simulans FBgn0183909 I 0.000
GD15001 Drosophila simulans FBgn0186673 I 0.000
GJ11245 Drosophila virilis FBgn0198506 I 0.000
GJ13774 Drosophila virilis FBgn0200993 I 0.000
GK10545 Drosophila willistoni FBgn0212560 I 0.000
GK10566 Drosophila willistoni FBgn0212581 I 0.000
GK17344 Drosophila willistoni FBgn0219343 I 0.000
GE19793 Drosophila yakuba FBgn0237126 I 0.000
GE22389 Drosophila yakuba FBgn0239612 I 0.000
GE22392 Drosophila yakuba FBgn0239615 I 0.000
GE23274 Drosophila yakuba FBgn0240471 I 0.000
GB48727 Apis mellifera GB48727 I 0.000
GB51231 Apis mellifera GB51231 I 0.000
GB52331 Apis mellifera GB52331 I 0.000
HDID_0000406601 Hymenolepis diminuta HDID_0000406601 I 0.000
HHAL001315-PA Halyomorpha halys HHAL001315-PA I 0.000
HMEL010451 Heliconius melpomene HMEL010451 I 0.000
HNAJ_0001369901 Hymenolepis nana HNAJ_0001369901 I 0.000
Hsal_02927--XP_395932.2_APIME Harpegnathos saltator Hsal_02927--XP_395932.2_APIME I 0.000
Hsal_02933--XP_001120662.1_APIME Harpegnathos saltator Hsal_02933--XP_001120662.1_APIME I 0.000
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I 0.000
KGM_10290 Danaus plexippus KGM_10290 I 0.000
KGM_21348 Danaus plexippus KGM_21348 I 0.000
L798_11128 Zootermopsis nevadensis L798_11128 I 0.000
LCUP004919 Lucilia cuprina LCUP004919 I 0.000
LCUP004920 Lucilia cuprina LCUP004920 I 0.000
LCUP004922 Lucilia cuprina LCUP004922 I 0.000
LDEC003050 Leptinotarsa decemlineata LDEC003050 I 0.000
MDOA002495 Musca domestica MDOA002495 I 0.000
MDOA008593 Musca domestica MDOA008593 I 0.000
MDOA012160 Musca domestica MDOA012160 I 0.000
nRc.2.0.1.g43935 Romanomermis culicivorax nRc.2.0.1.g43935 I 0.000
NV16468 Nasonia vitripennis NV16468 I 0.000
PHUM468660 Pediculus humanus PHUM468660 I 0.000
PHUM470190 Pediculus humanus PHUM470190 I 0.000
PPAI002202 Phlebotomus papatasi PPAI002202 I 0.000
RPRC003216 Rhodnius prolixus RPRC003216 I 0.000
SINV19432 Solenopsis invicta SINV19432 I 0.000
SINV19531 Solenopsis invicta SINV19531 I 0.000
SMAR012614 Strigamia maritima SMAR012614 I 0.000
TC003409 Tribolium castaneum TC003409 I 0.000
TC003413 Tribolium castaneum TC003413 I 0.000
tetur34g00430 Tetranychus urticae tetur34g00430 I 0.000