Cagra.2310s0015 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.2310s0015 T286083_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2310s0015.1.p Myb 14 61
Cagra.2310s0015.1.p Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.675
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.697
MYB35 Arabidopsis thaliana AT3G28470 N 0.862
Bo7g091360 Brassica oleracea Bo7g091360 N 0.892
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.909
Bra025337 Brassica rapa Bra025337 N 0.892
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.909
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.725
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.702
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.713
Ca_10555 Cicer arietinum Ca_10555 N 0.717
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.673
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.691
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.681
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.769
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.735
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.700
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.909
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.713
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.709
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.718
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.745
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.722
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.722
MDP0000258046 Malus domestica MDP0000258046 N 0.729
mgf012871m Mimulus guttatus mgf012871m I 0.671
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.717
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.673
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.700
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.662
Pm015813 Prunus mume Pm015813 N 0.734
Pm024633 Prunus mume Pm024633 N 0.675
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.662
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.727
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.724
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.675
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.718
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.662
TCM_018082 Theobroma cacao TCM_018082 N 0.685
TCM_045715 Theobroma cacao TCM_045715 N 0.745
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.892
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.722
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.704