Ciclev10023930m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10023930m.g T286633_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10023930m Myb 14 61
Ciclev10023930m Myb 67 112

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.799
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.794
TCM_045715 Theobroma cacao TCM_045715 N 0.789
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.789
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.788
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.783
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.775
MDP0000258046 Malus domestica MDP0000258046 N 0.772
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.770
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.767
Pm015813 Prunus mume Pm015813 N 0.766
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.760
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.760
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.757
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.756
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.754
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.752
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.742
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.742
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.734
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.734
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.731
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.727
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.725
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.725
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.725
Cla019436 Citrullus lanatus Cla019436 N 0.724
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.723
Ca_10555 Cicer arietinum Ca_10555 N 0.723
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.720
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.716
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.716
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.716
Bo7g091360 Brassica oleracea Bo7g091360 N 0.708
Bra025337 Brassica rapa Bra025337 N 0.708
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.708
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.705
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.705
MYB35 Arabidopsis thaliana AT3G28470 N 0.704
TCM_018082 Theobroma cacao TCM_018082 N 0.703
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.702
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.691
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.691
Pm024633 Prunus mume Pm024633 N 0.691
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.691
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.691
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.691
mgf012871m Mimulus guttatus mgf012871m I 0.688
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.686
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.682
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.675
Bra002448 Brassica rapa Bra002448 I 0.670
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N 0.669
F775_14388 Aegilops tauschii F775_14388 I 0.666
OB03G23760 Oryza brachyantha OB03G23760 I 0.666
OBART03G13840 Oryza barthii OBART03G13840 I 0.666
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.666
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.666
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.666
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.666
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.666
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.666
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.666
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.666
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.666
RAX1 Arabidopsis lyrata Al_scaffold_0006_2171 I 0.661
RAX1 Arabidopsis thaliana AT5G23000 I 0.661
Bo2g024590 Brassica oleracea Bo2g024590 I 0.661
Bra020228 Brassica rapa Bra020228 I 0.661
Bostr.10199s0146 Boechera stricta Bostr.10199s0146 I 0.661
Cagra.3954s0035 Capsella grandiflora Cagra.3954s0035 I 0.661
Carubv10002949m.g Capsella rubella Carubv10002949m.g I 0.661
Thhalv10014063m.g Eutrema salsugineum Thhalv10014063m.g I 0.661