Cla019436 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla019436 T283307_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019436 Myb 14 61
Cla019436 Myb 67 112

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.867
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.813
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.808
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.808
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.794
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.783
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.783
TCM_045715 Theobroma cacao TCM_045715 N 0.781
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.781
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.780
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.771
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.759
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.754
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.754
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.754
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.751
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.751
MDP0000258046 Malus domestica MDP0000258046 N 0.747
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.745
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.744
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.741
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.734
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.734
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.731
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.726
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.726
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.724
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.722
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.717
Pm024633 Prunus mume Pm024633 N 0.717
F775_14388 Aegilops tauschii F775_14388 I 0.712
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.712
OB03G23760 Oryza brachyantha OB03G23760 I 0.712
OBART03G13840 Oryza barthii OBART03G13840 I 0.712
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.712
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.712
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.712
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.712
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.712
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.712
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.712
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.712
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.712
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.711
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.709
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.709
Ca_10555 Cicer arietinum Ca_10555 N 0.709
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.706
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.703
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.695
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.695
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.691
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.691
Pm015813 Prunus mume Pm015813 N 0.689
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.686
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.686
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.686
MTR_3g045430 Medicago truncatula MTR_3g045430 N 0.682
e_gw1.141.66.1 Physcomitrella patens e_gw1.141.66.1 N 0.679
OPUNC12G18070 Oryza punctata OPUNC12G18070 I 0.675
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.672
MYB35 Arabidopsis thaliana AT3G28470 N 0.669
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.666
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.666
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.665
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.665
TCM_022255 Theobroma cacao TCM_022255 I 0.664
mgf017404m Mimulus guttatus mgf017404m I 0.663