POPTR_0012s07450 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0012s07450 T278421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s07450.1 Myb 14 61
POPTR_0012s07450.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.888
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.868
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.834
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.834
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.830
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.825
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.819
TCM_045715 Theobroma cacao TCM_045715 N 0.799
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.799
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.799
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.799
Cla019436 Citrullus lanatus Cla019436 N 0.794
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.790
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.788
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.783
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.773
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.767
MDP0000258046 Malus domestica MDP0000258046 N 0.764
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.762
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.762
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.753
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.752
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.749
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.745
Pm015813 Prunus mume Pm015813 N 0.736
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.734
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.728
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.727
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.726
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.726
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.723
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.718
Pm024633 Prunus mume Pm024633 N 0.718
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.718
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.717
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.715
Ca_10555 Cicer arietinum Ca_10555 N 0.715
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.702
TCM_018082 Theobroma cacao TCM_018082 N 0.695
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N 0.686
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.681
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.681
e_gw1.141.66.1 Physcomitrella patens e_gw1.141.66.1 N 0.681
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.681
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.681
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.680
Bo7g091360 Brassica oleracea Bo7g091360 N 0.679
Bra025337 Brassica rapa Bra025337 N 0.679
TCM_022255 Theobroma cacao TCM_022255 I 0.679
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.679
MYB35 Arabidopsis thaliana AT3G28470 N 0.675
gw1.295.9.1 Physcomitrella patens gw1.295.9.1 N 0.673
F775_14388 Aegilops tauschii F775_14388 I 0.670
OB03G23760 Oryza brachyantha OB03G23760 I 0.670
OBART03G13840 Oryza barthii OBART03G13840 I 0.670
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.670
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.670
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.670
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.670
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.670
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.670
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.670
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.670
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.670
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.670
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.670
Solyc06g074910.2 Solanum lycopersicum Solyc06g074910.2 I 0.669
Pm026353 Prunus mume Pm026353 I 0.669
Lus10023002.g Linum usitatissimum Lus10023002.g I 0.669
e_gw1.204.95.1 Physcomitrella patens e_gw1.204.95.1 N 0.668
mgf012871m Mimulus guttatus mgf012871m I 0.664
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.663
SapurV1A.0584s0070 Salix purpurea SapurV1A.0584s0070 I 0.663
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.662
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.662
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.662
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.662
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I 0.661
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.661
Solyc11g069030.1 Solanum lycopersicum Solyc11g069030.1 I 0.661