ATMYB35 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0017s11140 T278507_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s11140.1 Myb 14 61
POPTR_0017s11140.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.867
Ca_10555 Cicer arietinum Ca_10555 N 0.867
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.855
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.850
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.850
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.844
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.840
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.831
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.825
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.824
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.814
TCM_018082 Theobroma cacao TCM_018082 N 0.788
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.780
mgf012871m Mimulus guttatus mgf012871m I 0.777
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.774
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.774
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.767
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.764
TCM_045715 Theobroma cacao TCM_045715 N 0.762
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.762
MDP0000258046 Malus domestica MDP0000258046 N 0.759
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.756
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.752
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.751
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.751
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.743
MYB35 Arabidopsis thaliana AT3G28470 N 0.740
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.738
Pm015813 Prunus mume Pm015813 N 0.738
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.738
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.738
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.734
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.729
Bo7g091360 Brassica oleracea Bo7g091360 N 0.727
Bra025337 Brassica rapa Bra025337 N 0.727
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.727
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.727
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.727
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.727
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.727
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.725
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.721
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.719
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.717
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.713
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N 0.713
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.711
Cla019436 Citrullus lanatus Cla019436 N 0.709
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.694
F775_14388 Aegilops tauschii F775_14388 I 0.692
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.692
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.692
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.692
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.687
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.687
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.687
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.687
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.687
OS05G0553400 Oryza sativa OS05G0553400 I 0.687
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.687
Si022874m.g Setaria italica Si022874m.g I 0.687
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.687
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.683
Pm024633 Prunus mume Pm024633 N 0.683
BRADI2G17280 Brachypodium distachyon BRADI2G17280 N 0.681
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.679
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.677
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.677
mgf021409m Mimulus guttatus mgf021409m I 0.677
GRMZM2G006352 Zea mays GRMZM2G006352 I 0.672
Si002350m.g Setaria italica Si002350m.g I 0.672
Pavir.J34453 Panicum virgatum Pavir.J34453 I 0.672
Bra002448 Brassica rapa Bra002448 I 0.670
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.670
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.670
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.670
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.666
OB03G23760 Oryza brachyantha OB03G23760 I 0.662
OBART03G13840 Oryza barthii OBART03G13840 I 0.662
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.662
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.662
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.662
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.662
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.662
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.662
RAX1 Arabidopsis lyrata Al_scaffold_0006_2171 I 0.661
RAX1 Arabidopsis thaliana AT5G23000 I 0.661
Bo2g024590 Brassica oleracea Bo2g024590 I 0.661
Bra020228 Brassica rapa Bra020228 I 0.661
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.661
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.661
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.661
Bostr.10199s0146 Boechera stricta Bostr.10199s0146 I 0.661
Cagra.3954s0035 Capsella grandiflora Cagra.3954s0035 I 0.661
Carubv10002949m.g Capsella rubella Carubv10002949m.g I 0.661
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.661
Thhalv10014063m.g Eutrema salsugineum Thhalv10014063m.g I 0.661
PK14382.1 Cannabis sativa PK14382.1 I 0.661