OBART03G13840 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART03G13840 T275486_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.671 0.667
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.671 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G13840.1 Myb 14 62
OBART03G13840.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB03G23760 Oryza brachyantha OB03G23760 I 0.909
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.909
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.909
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.909
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.909
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.909
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.900
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.892
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.892
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.883
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.883
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.883
F775_14388 Aegilops tauschii F775_14388 I 0.879
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.879
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.879
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.879
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.801
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.766
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.742
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.736
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.734
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.727
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.722
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.719
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.719
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.719
TCM_045715 Theobroma cacao TCM_045715 N 0.715
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.715
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.714
Cla019436 Citrullus lanatus Cla019436 N 0.712
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.707
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.707
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.707
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.706
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.706
Cla008857 Citrullus lanatus Cla008857 I 0.701
mgf021784m Mimulus guttatus mgf021784m I 0.701
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.701
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.701
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.700
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.700
Bo8g078940 Brassica oleracea Bo8g078940 I 0.697
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.697
e_gw1.204.95.1 Physcomitrella patens e_gw1.204.95.1 N 0.696
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.696
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.696
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.696
Ciclev10028804m.g Citrus clementina Ciclev10028804m.g I 0.695
orange1.1g019787m.g Citrus sinensis orange1.1g019787m.g I 0.695
PK26008.1 Cannabis sativa PK26008.1 I 0.692
Bra017963 Brassica rapa Bra017963 I 0.691
Ciclev10010621m.g Citrus clementina Ciclev10010621m.g I 0.691
orange1.1g045583m.g Citrus sinensis orange1.1g045583m.g I 0.691
F775_07686 Aegilops tauschii F775_07686 I 0.687
TRIUR3_21241 Triticum urartu TRIUR3_21241 I 0.687
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.686
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.686
F775_22184 Aegilops tauschii F775_22184 I 0.685
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I 0.685
TCM_037245 Theobroma cacao TCM_037245 I 0.685
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I 0.685
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.684
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.684
LjT05A08.60.nd Lotus japonicus LjT05A08.60.nd I 0.684
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.683
POPTR_0006s12530 Populus trichocarpa POPTR_0006s12530 I 0.680
Cla018072 Citrullus lanatus Cla018072 I 0.680
cassava26711.m1 Manihot esculenta cassava26711.m1 I 0.680
Cucsa.306690 Cucumis sativus Cucsa.306690 I 0.680
evm.TU.supercontig_102.29 Carica papaya evm.TU.supercontig_102.29 I 0.680
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I 0.680
Gorai.010G028800 Gossypium raimondii Gorai.010G028800 I 0.680
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.680
SapurV1A.0589s0050 Salix purpurea SapurV1A.0589s0050 I 0.680
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.679
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.679
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.679
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.679
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N 0.679
mgf017404m Mimulus guttatus mgf017404m I 0.678
MTR_4g128670 Medicago truncatula MTR_4g128670 I 0.677
MLOC_5098 Hordeum vulgare MLOC_5098 I 0.676
cassava16944.m1 Manihot esculenta cassava16944.m1 I 0.676
mgf021409m Mimulus guttatus mgf021409m I 0.676
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.676
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I 0.676
BGIOSGA009166 Oryza indica BGIOSGA009166 I 0.675
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.675
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.675
LPERR02G28940 Leersia perrieri LPERR02G28940 I 0.675
MLOC_58499 Hordeum vulgare MLOC_58499 I 0.675
OB02G41990 Oryza brachyantha OB02G41990 I 0.675
OB05G32650 Oryza brachyantha OB05G32650 I 0.675
OBART02G35180 Oryza barthii OBART02G35180 I 0.675
OGLUM02G36330 Oryza glumaepatula OGLUM02G36330 I 0.675
OLONG_007639 Oryza longistaminata OLONG_007639 I 0.675
ONIVA02G37300 Oryza nivara ONIVA02G37300 I 0.675
OPUNC02G32390 Oryza punctata OPUNC02G32390 I 0.675
ORGLA02G0304700 Oryza glaberrima ORGLA02G0304700 I 0.675
ORUFI02G36680 Oryza rufipogon ORUFI02G36680 I 0.675
OS02G0786400 Oryza sativa OS02G0786400 I 0.675
Si017415m.g Setaria italica Si017415m.g I 0.675
TCM_038898 Theobroma cacao TCM_038898 I 0.675
Traes_6AL_FF1508B19 Triticum aestivum Traes_6AL_FF1508B19 I 0.675
Traes_6BL_7755E4A8A Triticum aestivum Traes_6BL_7755E4A8A I 0.675
Traes_6DL_29EF04226 Triticum aestivum Traes_6DL_29EF04226 I 0.675
TRIUR3_13802 Triticum urartu TRIUR3_13802 I 0.675
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I 0.675
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.675
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.675
Lus10016139.g Linum usitatissimum Lus10016139.g I 0.675
Lus10021428.g Linum usitatissimum Lus10021428.g I 0.675
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.675
MDP0000587648 Malus domestica MDP0000587648 I 0.675
Pavir.Aa00264 Panicum virgatum Pavir.Aa00264 I 0.675
Pavir.Ab03119 Panicum virgatum Pavir.Ab03119 I 0.675
OB03G42660 Oryza brachyantha OB03G42660 I 0.674
OPUNC12G18070 Oryza punctata OPUNC12G18070 I 0.674
PGSC0003DMG400002013 Solanum tuberosum PGSC0003DMG400002013 I 0.674
PGSC0003DMG400003890 Solanum tuberosum PGSC0003DMG400003890 I 0.674
PRUPE_ppa008732mg Prunus persica PRUPE_ppa008732mg I 0.674
Solyc09g008250.2 Solanum lycopersicum Solyc09g008250.2 I 0.674
Cucsa.385830 Cucumis sativus Cucsa.385830 I 0.674
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I 0.674
MDP0000245436 Malus domestica MDP0000245436 I 0.674
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.673
cassava34548.m1 Manihot esculenta cassava34548.m1 I 0.672
mgf012871m Mimulus guttatus mgf012871m I 0.672
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.671
AMTR_s00076p00157170 Amborella trichopoda AMTR_s00076p00157170 I 0.671
RAX3 Arabidopsis thaliana AT3G49690 D 0.671
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.671
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.671
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.671
GLYMA10G06190 Glycine max GLYMA10G06190 I 0.671
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.671
GLYMA13G20510 Glycine max GLYMA13G20510 I 0.671
GLYMA14G10340 Glycine max GLYMA14G10340 I 0.671
GRMZM2G015021 Zea mays GRMZM2G015021 I 0.671
GRMZM2G104789 Zea mays GRMZM2G104789 I 0.671
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.671
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.671
O49746_ARATH Arabidopsis thaliana O49746_ARATH I 0.671
OBART03G35660 Oryza barthii OBART03G35660 I 0.671
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.671
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.671
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.671
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.671
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.671
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.671
OS03G0771100 Oryza sativa OS03G0771100 I 0.671
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.671
POPTR_0004s22490 Populus trichocarpa POPTR_0004s22490 I 0.671
POPTR_0009s01270 Populus trichocarpa POPTR_0009s01270 I 0.671
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.671
PRUPE_ppa007823mg Prunus persica PRUPE_ppa007823mg I 0.671
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.671
Si036681m.g Setaria italica Si036681m.g I 0.671
TCM_000861 Theobroma cacao TCM_000861 I 0.671
TCM_034634 Theobroma cacao TCM_034634 I 0.671
TCM_042012 Theobroma cacao TCM_042012 I 0.671
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.671
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.671
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.671
Cla014272 Citrullus lanatus Cla014272 I 0.671
Cla021213 Citrullus lanatus Cla021213 I 0.671
Pm001105 Prunus mume Pm001105 I 0.671
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.671
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.671
cassava26004.m1 Manihot esculenta cassava26004.m1 I 0.671
cassava28503.m1 Manihot esculenta cassava28503.m1 I 0.671
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.671
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.671
Cucsa.395340 Cucumis sativus Cucsa.395340 I 0.671
mgf024894m Mimulus guttatus mgf024894m I 0.671
Aquca_062_00019 Aquilegia coerulea Aquca_062_00019 I 0.671
Aquca_068_00041 Aquilegia coerulea Aquca_068_00041 I 0.671
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.671
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.671
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.671
gene28902-v1.0-hybrid Fragaria vesca gene28902-v1.0-hybrid I 0.671
Gorai.007G227500 Gossypium raimondii Gorai.007G227500 I 0.671
Gorai.009G110800 Gossypium raimondii Gorai.009G110800 I 0.671
Gorai.013G269300 Gossypium raimondii Gorai.013G269300 I 0.671
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.671
MDP0000229498 Malus domestica MDP0000229498 I 0.671
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.671
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.671
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.671
SapurV1A.0049s0100 Salix purpurea SapurV1A.0049s0100 I 0.671
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.671
SapurV1A.1188s0040 Salix purpurea SapurV1A.1188s0040 I 0.671
PK05741.1 Cannabis sativa PK05741.1 I 0.671
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I 0.671
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I 0.670
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.670
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.670
MDP0000258046 Malus domestica MDP0000258046 N 0.670
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.670
Lus10001394.g Linum usitatissimum Lus10001394.g I 0.669
PK16424.1 Cannabis sativa PK16424.1 I 0.669
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I 0.667
GSMUA_Achr5G22760_001 Musa acuminata GSMUA_Achr5G22760_001 I 0.667
GSMUA_Achr6G01850_001 Musa acuminata GSMUA_Achr6G01850_001 I 0.667
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.667
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.667
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.667
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.667
MYB36 Arabidopsis thaliana AT5G57620 I 0.666
ATMYB68 Arabidopsis thaliana AT5G65790 I 0.666
Bo2g030240 Brassica oleracea Bo2g030240 I 0.666
Bo2g168190 Brassica oleracea Bo2g168190 I 0.666
Bo3g019230 Brassica oleracea Bo3g019230 I 0.666
Bo3g097710 Brassica oleracea Bo3g097710 I 0.666
Bo9g018910 Brassica oleracea Bo9g018910 I 0.666
Bo9g133340 Brassica oleracea Bo9g133340 I 0.666
Bra006811 Brassica rapa Bra006811 I 0.666
Bra020428 Brassica rapa Bra020428 I 0.666
Bra024419 Brassica rapa Bra024419 I 0.666
Bra031847 Brassica rapa Bra031847 I 0.666
BRADI4G38965 Brachypodium distachyon BRADI4G38965 I 0.666
F775_02630 Aegilops tauschii F775_02630 I 0.666
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I 0.666
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.666
GLYMA17G35020 Glycine max GLYMA17G35020 I 0.666
GRMZM2G090837 Zea mays GRMZM2G090837 I 0.666
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I 0.666
MTR_3g103570 Medicago truncatula MTR_3g103570 I 0.666
Sb02g012860 Sorghum bicolor Sb02g012860 I 0.666
MYB36 Arabidopsis lyrata scaffold_802340.1 I 0.666
Si030544m.g Setaria italica Si030544m.g I 0.666
cassava27131.m1 Manihot esculenta cassava27131.m1 I 0.666
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I 0.666
Bostr.26833s0495 Boechera stricta Bostr.26833s0495 I 0.666
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I 0.666
Cagra.2848s0043 Capsella grandiflora Cagra.2848s0043 I 0.666
Carubv10026749m.g Capsella rubella Carubv10026749m.g I 0.666
Carubv10027655m.g Capsella rubella Carubv10027655m.g I 0.666
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.666
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I 0.666
Pavir.Ba03178 Panicum virgatum Pavir.Ba03178 I 0.666
Pavir.Bb01783 Panicum virgatum Pavir.Bb01783 I 0.666
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I 0.666
Thhalv10015689m.g Eutrema salsugineum Thhalv10015689m.g I 0.666
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.665
MTR_2g095520 Medicago truncatula MTR_2g095520 I 0.665
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.665
MTR_1g017000 Medicago truncatula MTR_1g017000 I 0.664
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.664
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.664
Cla023198 Citrullus lanatus Cla023198 I 0.664
GSMUA_Achr7G19530_001 Musa acuminata GSMUA_Achr7G19530_001 I 0.663
Pm026353 Prunus mume Pm026353 I 0.663
Gorai.013G246200 Gossypium raimondii Gorai.013G246200 I 0.663
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.662
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.662
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.662
VIT_06s0061g00470 Vitis vinifera VIT_06s0061g00470 I 0.662
Ca_02249 Cicer arietinum Ca_02249 I 0.662
Ca_09203 Cicer arietinum Ca_09203 I 0.662
Ca_10555 Cicer arietinum Ca_10555 N 0.662
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.662
evm.TU.supercontig_65.37 Carica papaya evm.TU.supercontig_65.37 I 0.662
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.662
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I 0.661
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.661
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.661