gene08793-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene08793-v1.0-hybrid T287267_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.839 0.950
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.809 0.885
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.809 0.885
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.809 0.885
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.794 0.935
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.696 0.827
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.675 0.784
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.669 0.755
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna08793.1-v1.0-hybrid Myb 39 85
mrna08793.1-v1.0-hybrid Myb 91 137
mrna08793.1-v1.0-hybrid Myb 143 187

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011488 Calypte anna Aan_R011488 I
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I
Afo_R004723 Aptenodytes forsteri Afo_R004723 I
Alligator_sinensis_CCG009660.1 Alligator sinensis Alligator_sinensis_CCG009660.1 I
Alligator_sinensis_CCG014115.1 Alligator sinensis Alligator_sinensis_CCG014115.1 I
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I
Brh_R001903 Buceros rhinoceros Brh_R001903 I
Brh_R009461 Buceros rhinoceros Brh_R009461 I
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I
Cmyd_10008872 Chelonia mydas Cmyd_10008872 I
Cmyd_10013042 Chelonia mydas Cmyd_10013042 I
Cmyd_10014540 Chelonia mydas Cmyd_10014540 I
D918_02805 Trichuris suis D918_02805 I
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I
PROX1 Anolis carolinensis ENSACAG00000006174 I
ENSAMEG00000015776 Ailuropoda melanoleuca ENSAMEG00000015776 I
ENSAMEG00000018305 Ailuropoda melanoleuca ENSAMEG00000018305 I
ENSAMXG00000011717 Astyanax mexicanus ENSAMXG00000011717 I
ENSAMXG00000012231 Astyanax mexicanus ENSAMXG00000012231 I
ENSAMXG00000014376 Astyanax mexicanus ENSAMXG00000014376 I
ENSAPLG00000010950 Anas platyrhynchos ENSAPLG00000010950 I
PROX1 Bos taurus ENSBTAG00000010978 I
PROX2 Bos taurus ENSBTAG00000015052 I
ENSBTAP00000014573-D1 Bos grunniens ENSBTAP00000014573-D1 I
PROX1 Canis familiaris ENSCAFG00000012445 I
PROX2 Canis familiaris ENSCAFG00000016985 I
PROX2 Choloepus hoffmanni ENSCHOG00000000477 I
PROX1 Choloepus hoffmanni ENSCHOG00000010660 I
PROX1 Callithrix jacchus ENSCJAG00000015514 I
PROX2 Callithrix jacchus ENSCJAG00000020548 I
PROX2 Cavia porcellus ENSCPOG00000009322 I
PROX1 Cavia porcellus ENSCPOG00000011987 I
ENSCSAG00000012283 Chlorocebus sabaeus ENSCSAG00000012283 I
ENSCSAG00000015530 Chlorocebus sabaeus ENSCSAG00000015530 I
prox2 Danio rerio ENSDARG00000041952 I
prox1a Danio rerio ENSDARG00000055158 I
prox1b Danio rerio ENSDARG00000088810 I
PROX1 Dasypus novemcinctus ENSDNOG00000001297 I
PROX2 Dasypus novemcinctus ENSDNOG00000005528 I
Prox1 Dipodomys ordii ENSDORG00000007622 I
PROX1 Equus caballus ENSECAG00000019220 I
ENSECAG00000023529 Equus caballus ENSECAG00000023529 I
ENSFALG00000006312 Ficedula albicollis ENSFALG00000006312 I
ENSFALG00000012357 Ficedula albicollis ENSFALG00000012357 I
PROX2 Felis catus ENSFCAG00000028658 I
PROX1 Felis catus ENSFCAG00000029702 I
PROX1 Homo sapiens ENSG00000117707 D
PROX2 Homo sapiens ENSG00000119608 I
prox2 Gasterosteus aculeatus ENSGACG00000007538 I
prox1a Gasterosteus aculeatus ENSGACG00000010140 I
ENSGACG00000014345 Gasterosteus aculeatus ENSGACG00000014345 I
PROX1 Gallus gallus ENSGALG00000009791 I
PROX1 Gorilla gorilla ENSGGOG00000015130 I
PROX2 Gorilla gorilla ENSGGOG00000022893 I
ENSGMOG00000001679 Gadus morhua ENSGMOG00000001679 I
ENSGMOG00000009022 Gadus morhua ENSGMOG00000009022 I
ENSGMOG00000011081 Gadus morhua ENSGMOG00000011081 I
ENSGMOG00000015166 Gadus morhua ENSGMOG00000015166 I
ENSLACG00000013691 Latimeria chalumnae ENSLACG00000013691 I
ENSLACG00000018909 Latimeria chalumnae ENSLACG00000018909 I
PROX1 Loxodonta africana ENSLAFG00000006344 I
PROX2 Loxodonta africana ENSLAFG00000012545 I
ENSLOCG00000010701 Lepisosteus oculatus ENSLOCG00000010701 I
ENSLOCG00000016698 Lepisosteus oculatus ENSLOCG00000016698 I
ENSMEUG00000002316 Macropus eugenii ENSMEUG00000002316 I
ENSMEUG00000013465 Macropus eugenii ENSMEUG00000013465 I
PROX1 Meleagris gallopavo ENSMGAG00000009635 I
ENSMICG00000006078 Microcebus murinus ENSMICG00000006078 I
PROX1 Microcebus murinus ENSMICG00000011593 I
PROX2 Myotis lucifugus ENSMLUG00000005898 I
PROX1 Myotis lucifugus ENSMLUG00000006993 I
PROX1 Macaca mulatta ENSMMUG00000011914 I
ENSMODG00000006137 Monodelphis domestica ENSMODG00000006137 I
ENSMPUG00000009289 Mustela putorius furo ENSMPUG00000009289 I
ENSMPUG00000013456 Mustela putorius furo ENSMPUG00000013456 I
Prox1 Mus musculus ENSMUSG00000010175 I
Prox2 Mus musculus ENSMUSG00000042320 I
ENSNLEG00000014435 Nomascus leucogenys ENSNLEG00000014435 I
ENSNLEG00000016325 Nomascus leucogenys ENSNLEG00000016325 I
PROX2 Ornithorhynchus anatinus ENSOANG00000009815 I
ENSOARG00000001473 Ovis aries ENSOARG00000001473 I
ENSOARG00000009324 Ovis aries ENSOARG00000009324 I
PROX1 Oryctolagus cuniculus ENSOCUG00000008274 I
PROX2 Oryctolagus cuniculus ENSOCUG00000021246 I
PROX2 Otolemur garnettii ENSOGAG00000001327 I
PROX1 Otolemur garnettii ENSOGAG00000017025 I
ENSONIG00000012467 Oreochromis niloticus ENSONIG00000012467 I
ENSONIG00000013518 Oreochromis niloticus ENSONIG00000013518 I
ENSONIG00000015279 Oreochromis niloticus ENSONIG00000015279 I
ENSONIG00000020193 Oreochromis niloticus ENSONIG00000020193 I
PROX1 Ochotona princeps ENSOPRG00000005115 I
PROX2 Ochotona princeps ENSOPRG00000011820 I
ENSORLG00000001996 Oryzias latipes ENSORLG00000001996 I
prox1a Oryzias latipes ENSORLG00000014947 I
prox2 Oryzias latipes ENSORLG00000016587 I
ENSP00000355925 Macaca fascicularis ENSP00000355925 I
ENSP00000405932-D1 Bos grunniens ENSP00000405932-D1 I
ENSPANG00000017714 Papio anubis ENSPANG00000017714 I
ENSPANG00000024084 Papio anubis ENSPANG00000024084 I
PROX2 Procavia capensis ENSPCAG00000006424 I
ENSPFOG00000003774 Poecilia formosa ENSPFOG00000003774 I
ENSPFOG00000014635 Poecilia formosa ENSPFOG00000014635 I
ENSPFOG00000015503 Poecilia formosa ENSPFOG00000015503 I
ENSPMAG00000006606 Petromyzon marinus ENSPMAG00000006606 I
ENSPPYG00000000224 Pongo abelii ENSPPYG00000000224 I
ENSPPYG00000005992 Pongo abelii ENSPPYG00000005992 I
ENSPSIG00000008098 Pelodiscus sinensis ENSPSIG00000008098 I
ENSPSIG00000017015 Pelodiscus sinensis ENSPSIG00000017015 I
PROX1 Pan troglodytes ENSPTRG00000001974 I
PROX2 Pan troglodytes ENSPTRG00000006542 I
PROX2 Pteropus vampyrus ENSPVAG00000000659 I
PROX1 Pteropus vampyrus ENSPVAG00000009067 I
Prox1 Rattus norvegicus ENSRNOG00000003694 I
Prox2 Rattus norvegicus ENSRNOG00000005054 I
ENSSHAG00000018304 Sarcophilus harrisii ENSSHAG00000018304 I
PROX2 Sus scrofa ENSSSCG00000002373 I
PROX1 Sus scrofa ENSSSCG00000015584 I
ENSSTOG00000023253 Ictidomys tridecemlineatus ENSSTOG00000023253 I
PROX2 Tupaia belangeri ENSTBEG00000014423 I
PROX1 Taeniopygia guttata ENSTGUG00000002974 I
ENSTGUG00000012170 Taeniopygia guttata ENSTGUG00000012170 I
ENSTNIG00000004923 Tetraodon nigroviridis ENSTNIG00000004923 I
ENSTNIG00000016354 Tetraodon nigroviridis ENSTNIG00000016354 I
prox1a Tetraodon nigroviridis ENSTNIG00000016378 I
prox2 Tetraodon nigroviridis ENSTNIG00000017414 I
ENSTRUG00000010061 Takifugu rubripes ENSTRUG00000010061 I
ENSTRUG00000012738 Takifugu rubripes ENSTRUG00000012738 I
prox1a Takifugu rubripes ENSTRUG00000013890 I
prox2 Takifugu rubripes ENSTRUG00000018353 I
PROX2 Tursiops truncatus ENSTTRG00000001912 I
PROX1 Tursiops truncatus ENSTTRG00000003405 I
PROX2 Vicugna pacos ENSVPAG00000003072 I
ENSXMAG00000003709 Xiphophorus maculatus ENSXMAG00000003709 I
ENSXMAG00000004000 Xiphophorus maculatus ENSXMAG00000004000 I
ENSXMAG00000009972 Xiphophorus maculatus ENSXMAG00000009972 I
ENSXMAG00000014663 Xiphophorus maculatus ENSXMAG00000014663 I
e_gw.483.46.1 Branchiostoma floridae e_gw.483.46.1 I
Gfo_R010932 Geospiza fortis Gfo_R010932 I
Myotis_brandtii_PROX1_10018242 Myotis brandtii Myotis_brandtii_PROX1_10018242 I
Myotis_brandtii_Prox1_10018243 Myotis brandtii Myotis_brandtii_Prox1_10018243 I
Myotis_brandtii_PROX2_10012935 Myotis brandtii Myotis_brandtii_PROX2_10012935 I
NECAME_07738 Necator americanus NECAME_07738 I
Ogr11789 Ophisaurus gracilis Ogr11789 I
Pvit_00353 Pogona vitticeps Pvit_00353 I
Pvit_01205 Pogona vitticeps Pvit_01205 I
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I
prox1 Xenopus tropicalis XB-GENE-485327 I
prox1.L Xenopus laevis XB-GENE-485331 I