Bo2g009300 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo2g009300 T292313_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac103
M07243_2.00 		Arabidopsis thaliana
TDVCTTGNDNHNCAAGTTWYY
RRWAACTTGNDNHNCAAGBHA		 Dap-seq
OMalley et al.(2016)
ANAC103_col_a 		0.901 0.743
anac103
M07244_2.00 		Arabidopsis thaliana
TTGNDNHNCAAGYTWY
RWARCTTGNDNHNCAA		 Dap-seq
OMalley et al.(2016)
ANAC103_colamp_a 		0.901 0.743
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g009300.1 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC082 Arabidopsis thaliana AT5G09330 N 0.925
anac103 Arabidopsis thaliana AT5G64060 D 0.901
Bo3g005150 Brassica oleracea Bo3g005150 N 0.934
Bo3g101690 Brassica oleracea Bo3g101690 I 0.881
Bo9g174090 Brassica oleracea Bo9g174090 N 0.918
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N 0.920
Bra006019 Brassica rapa Bra006019 N 0.911
Bra009379 Brassica rapa Bra009379 N 0.939
Bra024263 Brassica rapa Bra024263 I 0.881
Bra028640 Brassica rapa Bra028640 I 0.959
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.934
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.934
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.887
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.887
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.887
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.928
anac103 Arabidopsis lyrata fgenesh2_kg.8__2417__AT5G64060.1 I 0.895
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.891
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.934