PGSC0003DMG400018262 (Solanum tuberosum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 PGSC0003DMG400018262 T295134_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC035
M07186_2.00 		Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG		 Dap-seq
OMalley et al.(2016)
ANAC034_col 		0.958 0.930
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400047021 NAC/NAM 36 161

Links

Other NAC/NAM family TFs
Other Solanum tuberosum TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N
GT-3B Arabidopsis thaliana AT2G38250 N
Bo3g001460 Brassica oleracea Bo3g001460 N
Bo3g032310 Brassica oleracea Bo3g032310 N
Bo4g029680 Brassica oleracea Bo4g029680 N
Bo9g186070 Brassica oleracea Bo9g186070 N
Bostr.6251s0108 Boechera stricta Bostr.6251s0108 N
Bra000046 Brassica rapa Bra000046 N
Bra005127 Brassica rapa Bra005127 N
Bra005688 Brassica rapa Bra005688 N
Cagra.4082s0018 Capsella grandiflora Cagra.4082s0018 N
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N
Carubv10001432m.g Capsella rubella Carubv10001432m.g N
cassava39493.m1 Manihot esculenta cassava39493.m1 N
Ca_22200 Cicer arietinum Ca_22200 N
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N
fgenesh2_kg.6__73__AT5G01380.1 Arabidopsis lyrata fgenesh2_kg.6__73__AT5G01380.1 N
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N
Gorai.012G114700 Gossypium raimondii Gorai.012G114700 N
Lus10004806.g Linum usitatissimum Lus10004806.g N
MDP0000296708 Malus domestica MDP0000296708 N
MTR_4g015680 Medicago truncatula MTR_4g015680 N
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N
PGSC0003DMG400030246 Solanum tuberosum PGSC0003DMG400030246 N
PK23483.1 Cannabis sativa PK23483.1 N
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N
Solyc09g005560.2 Solanum lycopersicum Solyc09g005560.2 N
Thhalv10015815m.g Eutrema salsugineum Thhalv10015815m.g N