cassava2514.valid.m1 (Manihot esculenta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 cassava2514.valid.m1 T296865_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac103
M07243_2.00 		Arabidopsis thaliana
TDVCTTGNDNHNCAAGTTWYY
RRWAACTTGNDNHNCAAGBHA		 Dap-seq
OMalley et al.(2016)
ANAC103_col_a 		0.881 0.711
anac103
M07244_2.00 		Arabidopsis thaliana
TTGNDNHNCAAGYTWY
RWARCTTGNDNHNCAA		 Dap-seq
OMalley et al.(2016)
ANAC103_colamp_a 		0.881 0.711
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava2514.valid.m1 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Manihot esculenta TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30136.m001048 Ricinus communis 30136.m001048 N 0.894
AMTR_s00071p00055960 Amborella trichopoda AMTR_s00071p00055960 I 0.000
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.897
NAC082 Arabidopsis thaliana AT5G09330 N 0.000
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N 0.000
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N 0.000
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.883
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.883
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.967
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.967
cassava43226.valid.m1 Manihot esculenta cassava43226.valid.m1 N 0.927
cassava43227.valid.m1 Manihot esculenta cassava43227.valid.m1 N 0.927
Ciclev10001200m.g Citrus clementina Ciclev10001200m.g N 0.903
evm.TU.supercontig_42.145 Carica papaya evm.TU.supercontig_42.145 I 0.000
F775_32837 Aegilops tauschii F775_32837 N 0.882
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.873
GRMZM2G104400 Zea mays GRMZM2G104400 N 0.872
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N 0.887
LjSGA_024981.1 Lotus japonicus LjSGA_024981.1 N 0.913
Lus10020896.g Linum usitatissimum Lus10020896.g N 0.000
orange1.1g036240m.g Citrus sinensis orange1.1g036240m.g N 0.903
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.893
Pavir.J07259 Panicum virgatum Pavir.J07259 N 0.894
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N 0.880
PGSC0003DMG400028662 Solanum tuberosum PGSC0003DMG400028662 N 0.893
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.888
Solyc11g005920.1 Solanum lycopersicum Solyc11g005920.1 N 0.908
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.907
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.883
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N 0.882
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N 0.882
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N 0.882
TRIUR3_22935 Triticum urartu TRIUR3_22935 N 0.882