CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG06614
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG06614
T301487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-177
M02419_2.00
Caenorhabditis elegans
TCGRGANY
RNTCYCGA
PBM
Weirauch et al.(2014)
pTH9044
0.965
0.671
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG06614
Nuclear receptor
31
103
EECKICFQQGHGYHFGVFTCRACAAFFRRCHFSSIIEQRKCRLMNGNCGPNKNGRWFCKKCRLIKCLESGMTT
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000571401
Angiostrongylus costaricensis
ACOC_0000571401
N
0.000
ANCCAN_18250
Ancylostoma caninum
ANCCAN_18250
N
0.000
ANCCEY_02118
Ancylostoma ceylanicum
ANCCEY_02118
N
0.000
ANCDUO_05680
Ancylostoma duodenale
ANCDUO_05680
N
0.000
ASU_12051
Ascaris suum
ASU_12051
N
0.000
Bm4897
Brugia malayi
Bm4897
N
0.000
CRE16913
Caenorhabditis remanei
CRE16913
N
0.000
CRE27979
Caenorhabditis remanei
CRE27979
N
0.000
DICVIV_03671
Dictyocaulus viviparus
DICVIV_03671
N
0.000
Hba_17078
Heterorhabditis bacteriophora
Hba_17078
N
0.000
NBR_0000281601
Nippostrongylus brasiliensis
NBR_0000281601
N
0.000
nDi.2.2.2.g05496
Dirofilaria immitis
nDi.2.2.2.g05496
N
0.000
NECAME_18743
Necator americanus
NECAME_18743
N
0.000
nLs.2.1.2.g01496
Litomosoides sigmodontis
nLs.2.1.2.g01496
N
0.000
nOo.2.0.1.g00014
Onchocerca ochengi
nOo.2.0.1.g00014
N
0.000
OESDEN_00868
Oesophagostomum dentatum
OESDEN_00868
N
0.000
Ppa-lag-1
Pristionchus pacificus
PPA16712
N
0.000
SPAL_0001149300
Strongyloides papillosus
SPAL_0001149300
N
0.000
SSTP_0000504800
Strongyloides stercoralis
SSTP_0000504800
N
0.000
SVE_1985500
Strongyloides venezuelensis
SVE_1985500
N
0.000
SVUK_0001898701
Strongylus vulgaris
SVUK_0001898701
N
0.000
TCLT_0000154801
Thelazia callipaeda
TCLT_0000154801
N
0.000
TELCIR_20071
Teladorsagia circumcincta
TELCIR_20071
N
0.000
lag-1
Caenorhabditis elegans
WBGene00002245
N
0.000
WBGene00242124
Onchocerca volvulus
WBGene00242124
N
0.000
WUBG_04020
Wuchereria bancrofti
WUBG_04020
N
0.000