CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nhr-84
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003674
T306197_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-84
M02414_2.00
Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN
PBM
Weirauch et al.(2014)
pTH5828
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.807
0.557
For this family, TFs with SR scores >
0.745
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02414_2.00
Nuclear receptor
1
72
AKCRVCAMPSRGNHFGVLSCRACAAFFRRSFVHKKEYKCRQRNVGKCDVSGNDRYQCRACRLKKCKELGMTP
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T06C12.7
Nuclear receptor
26
97
AKCRVCAMPSRGNHFGVLSCRACAAFFRRSFVHKKEYKCRQRNVGKCDVSGNDRYQCRACRLKKCKELGMTP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy