L893_g2513 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g2513 T309353_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.919 0.571
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.893 0.571
THRA
M03368_2.00 		Homo sapiens
DTGACCTYATVAGGTCAH
DTGACCTBATRAGGTCAH		 SELEX
Jolma et al.(2013)
THRA_1 		0.892 0.629
THRA
M09275_2.00 		Homo sapiens
RGKWSDNNYVAGGWSAN
NTSWCCTBRNNHSWMCY		 Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C 		0.892 0.629
Thra
M09333_2.00 		Mus musculus
VRGGKCANNYVRGGHCA
TGDCCYBRNNTGMCCYB		 Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C 		0.892 0.629
Thra
M09619_2.00 		Mus musculus
GGKCANNYVRGGHCA
TGDCCYBRNNTGMCC		 Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347 		0.892 0.629
THRA
M11135_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$T3RALPHA_Q6 		0.892 0.629
GAG_AVIER
M11193_2.00 		Avian erythroblastosis virus
VHNTRAGGTCACSSNN
NNSSGTGACCTYANDB		 Transfac
Matys et al.(2006)
V$T3R_01 		0.889 0.600
THRB
M03379_2.00 		Homo sapiens
DTGACCTBATVAGGTCAN
NTGACCTBATVAGGTCAH		 SELEX
Jolma et al.(2013)
THRB_1 		0.885 0.629
THRB
M03380_2.00 		Homo sapiens
DTGACCTBANTRAGGTCAH
DTGACCTYANTVAGGTCAH		 SELEX
Jolma et al.(2013)
THRB_2 		0.885 0.629
THRB
M03381_2.00 		Homo sapiens
NTGWCCTYADNTRAGGTCAH
DTGACCTYANHTRAGGWCAN		 SELEX
Jolma et al.(2013)
THRB_3 		0.885 0.629
THRB
M05629_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1 		0.885 0.629
THRB
M05630_2.00 		Homo sapiens
NRRGGTCAYGACCYYN
NRRGGTCRTGACCYYN		 SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2 		0.885 0.629
THRB
M05633_2.00 		Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN		 SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1 		0.885 0.629
THRB
M05634_2.00 		Homo sapiens
TRAGGTCABVYVAGGTCAH
DTGACCTBRBVTGACCTYA		 SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2 		0.885 0.629
THRB
M09285_2.00 		Homo sapiens
VRVSYVABVKSAGGWCA
TGWCCTSMBVTBRSBYB		 Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C 		0.885 0.629
THRB
M11150_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01 		0.885 0.629
THRB
M05631_2.00 		Homo sapiens
NRGGTYRDRGGKYRN
NYRMCCYHYRACCYN		 SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1 		0.885 0.629
THRB
M05632_2.00 		Homo sapiens
NNRGGTCAYGACCYBN
NVRGGTCRTGACCYNN		 SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2 		0.885 0.629
THRB
M05635_2.00 		Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN		 SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1 		0.885 0.629
THRB
M05636_2.00 		Homo sapiens
YRAGGWCAYGYRAGGWCAH
DTGWCCTYRCRTGWCCTYR		 SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2 		0.885 0.629
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.858 0.586
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.858 0.586
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.858 0.586
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.858 0.586
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.858 0.586
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.858 0.586
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.858 0.586
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.858 0.586
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.858 0.586
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.858 0.586
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.858 0.586
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.858 0.586
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.858 0.586
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.858 0.586
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.858 0.586
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.855 0.571
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.855 0.571
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.855 0.571
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.855 0.571
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.855 0.571
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.855 0.571
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.855 0.571
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.855 0.571
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.855 0.571
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.853 0.557
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.853 0.557
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.853 0.557
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.853 0.557
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.853 0.557
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.853 0.557
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.853 0.557
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.853 0.557
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.853 0.557
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.853 0.557
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.853 0.557
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.853 0.557
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.853 0.557
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.841 0.486
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.841 0.486
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.841 0.486
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.824 0.557
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.824 0.557
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.824 0.557
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.824 0.557
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.824 0.557
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.824 0.557
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.765 0.629
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.765 0.629
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.765 0.629
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.765 0.614
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.765 0.614
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.765 0.614
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.765 0.614
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.765 0.614
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.759 0.471
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.759 0.471
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.759 0.471
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.759 0.471
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.759 0.471
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.759 0.471
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.759 0.471
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.759 0.471
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.759 0.471
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.759 0.471
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.759 0.471
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.759 0.471
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.759 0.471
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.759 0.471
NR6A1
M05627_2.00 		Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX 		0.755 0.514
NR6A1
M09284_2.00 		Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT		 Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B 		0.755 0.514
NR6A1
M11148_2.00 		Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN		 Transfac
Matys et al.(2006)
V$GCNF_01 		0.755 0.514
NR6A1
M11149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCNF_Q3 		0.755 0.514
NR6A1
M05628_2.00 		Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX 		0.755 0.514
RARG
M02397_2.00 		Homo sapiens
VGGTCANN
NNTGACCB		 PBM
Weirauch et al.(2014)
pTH5430 		0.750 0.557
Rarg
M00810_2.00 		Mus musculus
NNVGKTCANN
NNTGAMCBNN		 PBM
Weirauch et al.(2013)
pTH4269 		0.750 0.557
RARG
M03391_2.00 		Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS		 SELEX
Jolma et al.(2013)
RARG_1 		0.750 0.557
RARG
M03392_2.00 		Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_2 		0.750 0.557
RARG
M03393_2.00 		Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY		 SELEX
Jolma et al.(2013)
RARG_3 		0.750 0.557
RARG
M03394_2.00 		Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC		 SELEX
Jolma et al.(2013)
RARG_4 		0.750 0.557
RARG
M03395_2.00 		Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY		 SELEX
Jolma et al.(2013)
RARG_5 		0.750 0.557
RARG
M03396_2.00 		Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_6 		0.750 0.557
Rarg
M03416_2.00 		Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
Rarg_1 		0.750 0.557
Rarg
M03417_2.00 		Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY		 SELEX
Jolma et al.(2013)
Rarg_2 		0.750 0.557
Rarg
M03418_2.00 		Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT		 SELEX
Jolma et al.(2013)
Rarg_3 		0.750 0.557
RARG
M05653_2.00 		Homo sapiens
NRGGTCANV
BNTGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX 		0.750 0.557
RARG
M05649_2.00 		Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1 		0.750 0.557
RARG
M05650_2.00 		Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2 		0.750 0.557
Rarg
M05885_2.00 		Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN		 SMiLE-seq
Isakova et al.(2017)
RARg 		0.750 0.557
RARG
M09289_2.00 		Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B 		0.750 0.557
Rarg
M09300_2.00 		Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C 		0.750 0.557
Rarg
M09613_2.00 		Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY		 Misc
Heinz et al.(2010)
ES-RARg_GSE30538 		0.750 0.557
RARG
M11167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RARG_Q3 		0.750 0.557
RARG
M05654_2.00 		Homo sapiens
NRGGTCRNV
BNYGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX 		0.750 0.557
RARG
M05651_2.00 		Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1 		0.750 0.557
RARG
M05652_2.00 		Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2 		0.750 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g2513.t1 Nuclear receptor 80 149

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

904 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28320.m001139 Ricinus communis 28320.m001139 I
29588.m000873 Ricinus communis 29588.m000873 I
29841.m002846 Ricinus communis 29841.m002846 I
29848.m004566 Ricinus communis 29848.m004566 I
AMTR_s00019p00232450 Amborella trichopoda AMTR_s00019p00232450 I
AMTR_s00025p00249140 Amborella trichopoda AMTR_s00025p00249140 I
AMTR_s00150p00091360 Amborella trichopoda AMTR_s00150p00091360 I
Aquca_006_00004 Aquilegia coerulea Aquca_006_00004 I
Aquca_016_00154 Aquilegia coerulea Aquca_016_00154 I
WIN1 Arabidopsis thaliana AT1G15360 D
ERF003 Arabidopsis thaliana AT5G25190 D
BGIOSGA005433 Oryza indica BGIOSGA005433 I
BGIOSGA007748 Oryza indica BGIOSGA007748 I
BGIOSGA014193 Oryza indica BGIOSGA014193 I
BGIOSGA014194 Oryza indica BGIOSGA014194 I
BGIOSGA020923 Oryza indica BGIOSGA020923 I
BGIOSGA022427 Oryza indica BGIOSGA022427 I
Bo2g158960 Brassica oleracea Bo2g158960 I
Bo7g096000 Brassica oleracea Bo7g096000 N
Bo7g096180 Brassica oleracea Bo7g096180 I
Bo8g066410 Brassica oleracea Bo8g066410 I
Bo8g106100 Brassica oleracea Bo8g106100 I
Bo9g011380 Brassica oleracea Bo9g011380 I
Bo9g011440 Brassica oleracea Bo9g011440 I
Bostr.29827s0297 Boechera stricta Bostr.29827s0297 I
Bostr.7128s0149 Boechera stricta Bostr.7128s0149 I
Bra009824 Brassica rapa Bra009824 I
Bra016663 Brassica rapa Bra016663 I
Bra020490 Brassica rapa Bra020490 I
Bra026140 Brassica rapa Bra026140 I
Bra036536 Brassica rapa Bra036536 I
Bra036543 Brassica rapa Bra036543 I
BRADI1G36590 Brachypodium distachyon BRADI1G36590 I
BRADI1G47480 Brachypodium distachyon BRADI1G47480 I
BRADI3G07450 Brachypodium distachyon BRADI3G07450 I
BRADI3G54160 Brachypodium distachyon BRADI3G54160 I
BRADI5G24720 Brachypodium distachyon BRADI5G24720 I
Cagra.1945s0014 Capsella grandiflora Cagra.1945s0014 I
Cagra.2238s0086 Capsella grandiflora Cagra.2238s0086 I
Carubv10001796m.g Capsella rubella Carubv10001796m.g I
Carubv10010317m.g Capsella rubella Carubv10010317m.g I
cassava11389.m1 Manihot esculenta cassava11389.m1 I
cassava20662.m1 Manihot esculenta cassava20662.m1 I
cassava24223.valid.m1 Manihot esculenta cassava24223.valid.m1 I
cassava26230.m1 Manihot esculenta cassava26230.m1 I
cassava34153.m1 Manihot esculenta cassava34153.m1 I
cassava38443.m1 Manihot esculenta cassava38443.m1 I
cassava38444.m1 Manihot esculenta cassava38444.m1 I
cassava8560.m1 Manihot esculenta cassava8560.m1 I
Ca_01729 Cicer arietinum Ca_01729 I
Ca_02880 Cicer arietinum Ca_02880 I
Ca_06673 Cicer arietinum Ca_06673 I
Ca_09076 Cicer arietinum Ca_09076 I
Ca_13435 Cicer arietinum Ca_13435 I
Ca_20050 Cicer arietinum Ca_20050 I
chr1.LjT03I11.120.nd Lotus japonicus chr1.LjT03I11.120.nd I
chr4.LjT07P17.60.nc Lotus japonicus chr4.LjT07P17.60.nc I
Ciclev10009447m.g Citrus clementina Ciclev10009447m.g I
Ciclev10009593m.g Citrus clementina Ciclev10009593m.g I
Ciclev10026602m.g Citrus clementina Ciclev10026602m.g I
Ciclev10027305m.g Citrus clementina Ciclev10027305m.g I
Cla006213 Citrullus lanatus Cla006213 I
Cla012435 Citrullus lanatus Cla012435 I
Cla012914 Citrullus lanatus Cla012914 I
Cla012931 Citrullus lanatus Cla012931 I
Cla015579 Citrullus lanatus Cla015579 I
Cla016967 Citrullus lanatus Cla016967 I
Cla021283 Citrullus lanatus Cla021283 I
Cla021320 Citrullus lanatus Cla021320 I
Cla022694 Citrullus lanatus Cla022694 I
Cla022695 Citrullus lanatus Cla022695 I
Cucsa.096220 Cucumis sativus Cucsa.096220 I
Cucsa.105830 Cucumis sativus Cucsa.105830 I
Cucsa.162710 Cucumis sativus Cucsa.162710 I
Cucsa.162720 Cucumis sativus Cucsa.162720 I
Cucsa.271720 Cucumis sativus Cucsa.271720 I
Cucsa.292670 Cucumis sativus Cucsa.292670 I
Cucsa.310360 Cucumis sativus Cucsa.310360 I
estExt_gwp_gw1.C_580005 Physcomitrella patens estExt_gwp_gw1.C_580005 I
Eucgr.C01178 Eucalyptus grandis Eucgr.C01178 I
Eucgr.C02719 Eucalyptus grandis Eucgr.C02719 I
Eucgr.C04221 Eucalyptus grandis Eucgr.C04221 I
Eucgr.F03947 Eucalyptus grandis Eucgr.F03947 I
evm.TU.supercontig_10.113 Carica papaya evm.TU.supercontig_10.113 I
evm.TU.supercontig_10.254 Carica papaya evm.TU.supercontig_10.254 I
evm.TU.supercontig_127.4 Carica papaya evm.TU.supercontig_127.4 I
F775_03622 Aegilops tauschii F775_03622 I
F775_22946 Aegilops tauschii F775_22946 I
F775_28212 Aegilops tauschii F775_28212 I
SHN1 Arabidopsis lyrata fgenesh2_kg.1__1687__AT1G15360.1 I
fgenesh2_kg.6__2505__AT5G25190.1 Arabidopsis lyrata fgenesh2_kg.6__2505__AT5G25190.1 I
gene15036-v1.0-hybrid Fragaria vesca gene15036-v1.0-hybrid I
gene15940-v1.0-hybrid Fragaria vesca gene15940-v1.0-hybrid I
gene31040-v1.0-hybrid Fragaria vesca gene31040-v1.0-hybrid I
GLYMA04G06690 Glycine max GLYMA04G06690 I
GLYMA04G19650 Glycine max GLYMA04G19650 I
GLYMA06G06780 Glycine max GLYMA06G06780 I
GLYMA06G29110 Glycine max GLYMA06G29110 I
GLYMA07G02930 Glycine max GLYMA07G02930 I
GLYMA07G03500 Glycine max GLYMA07G03500 I
GLYMA08G22590 Glycine max GLYMA08G22590 I
GLYMA08G23160 Glycine max GLYMA08G23160 I
GLYMA13G23570 Glycine max GLYMA13G23570 I
GLYMA13G44660 Glycine max GLYMA13G44660 I
GLYMA14G13470 Glycine max GLYMA14G13470 I
GLYMA15G00660 Glycine max GLYMA15G00660 I
GLYMA15G01140 Glycine max GLYMA15G01140 I
GLYMA17G12330 Glycine max GLYMA17G12330 I
GLYMA17G33075 Glycine max GLYMA17G33075 I
Gorai.001G036500 Gossypium raimondii Gorai.001G036500 I
Gorai.001G042300 Gossypium raimondii Gorai.001G042300 I
Gorai.009G017500 Gossypium raimondii Gorai.009G017500 I
Gorai.009G060600 Gossypium raimondii Gorai.009G060600 I
Gorai.009G125100 Gossypium raimondii Gorai.009G125100 I
Gorai.010G117500 Gossypium raimondii Gorai.010G117500 I
Gorai.010G222900 Gossypium raimondii Gorai.010G222900 I
Gorai.011G082900 Gossypium raimondii Gorai.011G082900 I
GRMZM2G067463 Zea mays GRMZM2G067463 I
GRMZM2G085678 Zea mays GRMZM2G085678 I
GRMZM2G104260 Zea mays GRMZM2G104260 I
GRMZM2G106591 Zea mays GRMZM2G106591 I
GRMZM2G111415 Zea mays GRMZM2G111415 I
GRMZM2G135452 Zea mays GRMZM2G135452 I
GRMZM2G156006 Zea mays GRMZM2G156006 I
GSMUA_Achr10G27000_001 Musa acuminata GSMUA_Achr10G27000_001 I
GSMUA_Achr4G02200_001 Musa acuminata GSMUA_Achr4G02200_001 I
GSMUA_Achr5G22840_001 Musa acuminata GSMUA_Achr5G22840_001 I
GSMUA_Achr6G05210_001 Musa acuminata GSMUA_Achr6G05210_001 I
GSMUA_Achr7G10160_001 Musa acuminata GSMUA_Achr7G10160_001 I
GSMUA_Achr7G16060_001 Musa acuminata GSMUA_Achr7G16060_001 I
GSMUA_Achr7G19320_001 Musa acuminata GSMUA_Achr7G19320_001 I
GSMUA_Achr9G13760_001 Musa acuminata GSMUA_Achr9G13760_001 I
GSMUA_Achr9G28540_001 Musa acuminata GSMUA_Achr9G28540_001 I
gw1.21.122.1 Physcomitrella patens gw1.21.122.1 I
LjSGA_003590.1.1 Lotus japonicus LjSGA_003590.1.1 I
LjSGA_040388.1 Lotus japonicus LjSGA_040388.1 I
LjSGA_107677.3 Lotus japonicus LjSGA_107677.3 I
LjT09F21.30.nc Lotus japonicus LjT09F21.30.nc I
LPERR02G06710 Leersia perrieri LPERR02G06710 I
LPERR02G29600 Leersia perrieri LPERR02G29600 I
LPERR06G04830 Leersia perrieri LPERR06G04830 I
LPERR06G17010 Leersia perrieri LPERR06G17010 I
Lus10005716.g Linum usitatissimum Lus10005716.g I
Lus10009480.g Linum usitatissimum Lus10009480.g I
Lus10016815.g Linum usitatissimum Lus10016815.g I
Lus10019414.g Linum usitatissimum Lus10019414.g I
Lus10030097.g Linum usitatissimum Lus10030097.g I
Lus10035859.g Linum usitatissimum Lus10035859.g I
Lus10041614.g Linum usitatissimum Lus10041614.g I
MDP0000124316 Malus domestica MDP0000124316 I
MDP0000127054 Malus domestica MDP0000127054 I
MDP0000172065 Malus domestica MDP0000172065 I
MDP0000243375 Malus domestica MDP0000243375 I
MDP0000279733 Malus domestica MDP0000279733 I
MDP0000290880 Malus domestica MDP0000290880 I
MDP0000297646 Malus domestica MDP0000297646 I
MDP0000430870 Malus domestica MDP0000430870 I
MDP0000873258 Malus domestica MDP0000873258 I
mg019221m Mimulus guttatus mg019221m I
mgf005189m Mimulus guttatus mgf005189m I
MLOC_12747 Hordeum vulgare MLOC_12747 I
MLOC_55323 Hordeum vulgare MLOC_55323 I
MLOC_59305 Hordeum vulgare MLOC_59305 I
MLOC_6403 Hordeum vulgare MLOC_6403 I
MTR_2g103700 Medicago truncatula MTR_2g103700 I
MTR_3g106290 Medicago truncatula MTR_3g106290 I
MTR_4g008860 Medicago truncatula MTR_4g008860 I
MTR_4g010640 Medicago truncatula MTR_4g010640 I
MTR_4g114570 Medicago truncatula MTR_4g114570 I
OB02G17060 Oryza brachyantha OB02G17060 I
OB02G42740 Oryza brachyantha OB02G42740 I
OB04G34960 Oryza brachyantha OB04G34960 I
OB06G14850 Oryza brachyantha OB06G14850 I
OB06G28040 Oryza brachyantha OB06G28040 I
OBART02G07740 Oryza barthii OBART02G07740 I
OBART02G35950 Oryza barthii OBART02G35950 I
OBART04G27970 Oryza barthii OBART04G27970 I
OBART06G05300 Oryza barthii OBART06G05300 I
OBART06G20370 Oryza barthii OBART06G20370 I
OGLUM02G07820 Oryza glumaepatula OGLUM02G07820 I
OGLUM02G37170 Oryza glumaepatula OGLUM02G37170 I
OGLUM04G27860 Oryza glumaepatula OGLUM04G27860 I
OGLUM06G05450 Oryza glumaepatula OGLUM06G05450 I
OGLUM06G21440 Oryza glumaepatula OGLUM06G21440 I
OLONG_004398 Oryza longistaminata OLONG_004398 I
OLONG_005458 Oryza longistaminata OLONG_005458 I
OLONG_016936 Oryza longistaminata OLONG_016936 I
OMERI02G33910 Oryza meridionalis OMERI02G33910 I
OMERI04G23370 Oryza meridionalis OMERI04G23370 I
OMERI06G06320 Oryza meridionalis OMERI06G06320 I
OMERI06G20980 Oryza meridionalis OMERI06G20980 I
ONIVA02G09300 Oryza nivara ONIVA02G09300 I
ONIVA02G37990 Oryza nivara ONIVA02G37990 I
ONIVA04G26640 Oryza nivara ONIVA04G26640 I
ONIVA06G06080 Oryza nivara ONIVA06G06080 I
ONIVA06G24150 Oryza nivara ONIVA06G24150 I
OPUNC02G06960 Oryza punctata OPUNC02G06960 I
OPUNC06G05070 Oryza punctata OPUNC06G05070 I
OPUNC06G18570 Oryza punctata OPUNC06G18570 I
orange1.1g027896m.g Citrus sinensis orange1.1g027896m.g I
orange1.1g029507m.g Citrus sinensis orange1.1g029507m.g I
orange1.1g030482m.g Citrus sinensis orange1.1g030482m.g I
ORGLA02G0073000 Oryza glaberrima ORGLA02G0073000 I
ORGLA02G0312200 Oryza glaberrima ORGLA02G0312200 I
ORGLA04G0242300 Oryza glaberrima ORGLA04G0242300 I
ORGLA06G0167900 Oryza glaberrima ORGLA06G0167900 I
ORUFI03G26280 Oryza rufipogon ORUFI03G26280 I
ORUFI04G29600 Oryza rufipogon ORUFI04G29600 I
ORUFI06G05350 Oryza rufipogon ORUFI06G05350 I
ORUFI06G21790 Oryza rufipogon ORUFI06G21790 I
OS02G0202000 Oryza sativa OS02G0202000 I
OS02G0797100 Oryza sativa OS02G0797100 I
OS06G0181700 Oryza sativa OS06G0181700 I
OS06G0604000 Oryza sativa OS06G0604000 I
Pavir.Aa00196 Panicum virgatum Pavir.Aa00196 I
Pavir.Aa02977 Panicum virgatum Pavir.Aa02977 I
Pavir.Ab00737 Panicum virgatum Pavir.Ab00737 I
Pavir.Da00422 Panicum virgatum Pavir.Da00422 I
Pavir.Da02059 Panicum virgatum Pavir.Da02059 I
Pavir.Db01224 Panicum virgatum Pavir.Db01224 I
Pavir.Ga00062 Panicum virgatum Pavir.Ga00062 I
Pavir.J12977 Panicum virgatum Pavir.J12977 I
Pavir.J20772 Panicum virgatum Pavir.J20772 I
PDK_20s1355821g002 Phoenix dactylifera PDK_20s1355821g002 I
PGSC0003DMG400000636 Solanum tuberosum PGSC0003DMG400000636 I
PGSC0003DMG400002889 Solanum tuberosum PGSC0003DMG400002889 I
PGSC0003DMG400014127 Solanum tuberosum PGSC0003DMG400014127 I
PGSC0003DMG400014196 Solanum tuberosum PGSC0003DMG400014196 I
PGSC0003DMG400026136 Solanum tuberosum PGSC0003DMG400026136 I
PGSC0003DMG400028500 Solanum tuberosum PGSC0003DMG400028500 I
PGSC0003DMG400030228 Solanum tuberosum PGSC0003DMG400030228 I
PK28394.1 Cannabis sativa PK28394.1 I
Pm005717 Prunus mume Pm005717 I
Pm013752 Prunus mume Pm013752 I
Pm027542 Prunus mume Pm027542 I
POPTR_0001s14720 Populus trichocarpa POPTR_0001s14720 I
SHN1 Populus trichocarpa POPTR_0003s02750 I
POPTR_0003s17830 Populus trichocarpa POPTR_0003s17830 I
POPTR_0006s06870 Populus trichocarpa POPTR_0006s06870 I
POPTR_0006s27710 Populus trichocarpa POPTR_0006s27710 I
POPTR_0018s02280 Populus trichocarpa POPTR_0018s02280 I
POPTR_0018s13130 Populus trichocarpa POPTR_0018s13130 I
PRUPE_ppa010601mg Prunus persica PRUPE_ppa010601mg I
PRUPE_ppa011795mg Prunus persica PRUPE_ppa011795mg I
PRUPE_ppa016477mg Prunus persica PRUPE_ppa016477mg I
PRUPE_ppa024826mg Prunus persica PRUPE_ppa024826mg I
SapurV1A.0034s0630 Salix purpurea SapurV1A.0034s0630 I
SapurV1A.0198s0340 Salix purpurea SapurV1A.0198s0340 N
SapurV1A.0198s0350 Salix purpurea SapurV1A.0198s0350 N
SapurV1A.0199s0350 Salix purpurea SapurV1A.0199s0350 I
SapurV1A.0280s0090 Salix purpurea SapurV1A.0280s0090 I
SapurV1A.0705s0080 Salix purpurea SapurV1A.0705s0080 I
SapurV1A.0730s0010 Salix purpurea SapurV1A.0730s0010 I
SapurV1A.0835s0060 Salix purpurea SapurV1A.0835s0060 I
SapurV1A.1759s0040 Salix purpurea SapurV1A.1759s0040 I
SapurV1A.2028s0010 Salix purpurea SapurV1A.2028s0010 I
Sb04g006970 Sorghum bicolor Sb04g006970 I
Sb04g036020 Sorghum bicolor Sb04g036020 I
Sb06g031230 Sorghum bicolor Sb06g031230 I
Sb10g005520 Sorghum bicolor Sb10g005520 I
Sb10g023600 Sorghum bicolor Sb10g023600 I
SELMODRAFT_121842 Selaginella moellendorffii SELMODRAFT_121842 I
SELMODRAFT_73149 Selaginella moellendorffii SELMODRAFT_73149 I
SELMODRAFT_92334 Selaginella moellendorffii SELMODRAFT_92334 I
Si007359m.g Setaria italica Si007359m.g I
Si008394m.g Setaria italica Si008394m.g I
Si018550m.g Setaria italica Si018550m.g I
Si024352m.g Setaria italica Si024352m.g I
Solyc03g116610.2 Solanum lycopersicum Solyc03g116610.2 I
Solyc03g117130.2 Solanum lycopersicum Solyc03g117130.2 I
Solyc06g065820.2 Solanum lycopersicum Solyc06g065820.2 I
Solyc06g068360.2 Solanum lycopersicum Solyc06g068360.2 I
Solyc12g009490.1 Solanum lycopersicum Solyc12g009490.1 I
TCM_027157 Theobroma cacao TCM_027157 I
TCM_027394 Theobroma cacao TCM_027394 I
TCM_036933 Theobroma cacao TCM_036933 I
TCM_038081 Theobroma cacao TCM_038081 I
Thhalv10004973m.g Eutrema salsugineum Thhalv10004973m.g I
Thhalv10005514m.g Eutrema salsugineum Thhalv10005514m.g I
Thhalv10008845m.g Eutrema salsugineum Thhalv10008845m.g I
Thhalv10015363m.g Eutrema salsugineum Thhalv10015363m.g I
TRAES3BF176500010CFD_g Triticum aestivum TRAES3BF176500010CFD_g I
Traes_2AL_61DB73424 Triticum aestivum Traes_2AL_61DB73424 I
Traes_2BL_5BA37F95E Triticum aestivum Traes_2BL_5BA37F95E I
Traes_6AS_8E7166D79 Triticum aestivum Traes_6AS_8E7166D79 I
Traes_6DL_31D678054 Triticum aestivum Traes_6DL_31D678054 I
Traes_6DS_E6A0BE6CD Triticum aestivum Traes_6DS_E6A0BE6CD I
Traes_7AS_89D49F177 Triticum aestivum Traes_7AS_89D49F177 I
Traes_7BL_EB1DCAB4B Triticum aestivum Traes_7BL_EB1DCAB4B I
Traes_7DL_E1D7A51C8 Triticum aestivum Traes_7DL_E1D7A51C8 I
Traes_7DS_433704E8E Triticum aestivum Traes_7DS_433704E8E I
Traes_7DS_433704E8E1 Triticum aestivum Traes_7DS_433704E8E1 I
TRIUR3_22374 Triticum urartu TRIUR3_22374 I
TRIUR3_25005 Triticum urartu TRIUR3_25005 I
VIT_04s0008g06000 Vitis vinifera VIT_04s0008g06000 I
SHN1 Vitis vinifera VIT_09s0002g06750 I
VIT_09s0002g09120 Vitis vinifera VIT_09s0002g09120 I
VIT_09s0002g09140 Vitis vinifera VIT_09s0002g09140 I
VIT_11s0016g05340 Vitis vinifera VIT_11s0016g05340 I