TCLT_0000079701 (Thelazia callipaeda)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 TCLT_0000079701 T310750_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.992 0.871
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCLT_0000079701-mRNA-1 Nuclear receptor 188 258

Links

Other Nuclear receptor family TFs
Other Thelazia callipaeda TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30090.m000247 Ricinus communis 30090.m000247 N
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N
AT2G12646 Arabidopsis thaliana AT2G12646 N
BGIOSGA007009 Oryza indica BGIOSGA007009 N
BGIOSGA007635 Oryza indica BGIOSGA007635 N
BGIOSGA023427 Oryza indica BGIOSGA023427 N
Bo3g087070 Brassica oleracea Bo3g087070 N
Bo9g022400 Brassica oleracea Bo9g022400 N
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N
Bra013149 Brassica rapa Bra013149 N
Bra037203 Brassica rapa Bra037203 N
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N
Carubv10015124m.g Capsella rubella Carubv10015124m.g N
cassava41034.m1 Manihot esculenta cassava41034.m1 N
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N
Ca_06740 Cicer arietinum Ca_06740 N
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N
Cucsa.132770 Cucumis sativus Cucsa.132770 N
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N
GLYMA09G05781 Glycine max GLYMA09G05781 N
GLYMA09G12330 Glycine max GLYMA09G12330 N
GLYMA13G23360 Glycine max GLYMA13G23360 N
GLYMA15G23920 Glycine max GLYMA15G23920 N
GLYMA17G11470 Glycine max GLYMA17G11470 N
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N
GRMZM2G017882 Zea mays GRMZM2G017882 N
GRMZM2G070295 Zea mays GRMZM2G070295 N
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N
LPERR02G04770 Leersia perrieri LPERR02G04770 N
LPERR02G05550 Leersia perrieri LPERR02G05550 N
LPERR06G19930 Leersia perrieri LPERR06G19930 N
Lus10008031.g Linum usitatissimum Lus10008031.g N
Lus10008814.g Linum usitatissimum Lus10008814.g N
Lus10038103.g Linum usitatissimum Lus10038103.g N
Lus10039989.g Linum usitatissimum Lus10039989.g N
MDP0000639526 Malus domestica MDP0000639526 N
mgf020898m Mimulus guttatus mgf020898m N
MLOC_21744 Hordeum vulgare MLOC_21744 N
MLOC_37403 Hordeum vulgare MLOC_37403 N
MTR_4g116300 Medicago truncatula MTR_4g116300 N
OB02G14750 Oryza brachyantha OB02G14750 N
OB02G15630 Oryza brachyantha OB02G15630 N
OBART02G05520 Oryza barthii OBART02G05520 N
OBART06G24000 Oryza barthii OBART06G24000 N
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N
OLONG_011712 Oryza longistaminata OLONG_011712 N
OMERI06G23930 Oryza meridionalis OMERI06G23930 N
ONIVA02G05860 Oryza nivara ONIVA02G05860 N
ONIVA03G43780 Oryza nivara ONIVA03G43780 N
OPUNC02G04680 Oryza punctata OPUNC02G04680 N
OPUNC02G05490 Oryza punctata OPUNC02G05490 N
OPUNC06G21750 Oryza punctata OPUNC06G21750 N
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N
OS02G0172800 Oryza sativa OS02G0172800 N
OS02G0183000 Oryza sativa OS02G0183000 N
OS06G0666100 Oryza sativa OS06G0666100 N
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N
Pavir.J35161 Panicum virgatum Pavir.J35161 N
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N
PGSC0003DMG400007885 Solanum tuberosum PGSC0003DMG400007885 N
Pm027672 Prunus mume Pm027672 N
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N
Sb04g004830 Sorghum bicolor Sb04g004830 N
Sb04g005680 Sorghum bicolor Sb04g005680 N
Sb10g026620 Sorghum bicolor Sb10g026620 N
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N
Si018139m.g Setaria italica Si018139m.g N
Si019544m.g Setaria italica Si019544m.g N
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N
Solyc12g010470.1 Solanum lycopersicum Solyc12g010470.1 N
TCM_038233 Theobroma cacao TCM_038233 N
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N
TRIUR3_16881 Triticum urartu TRIUR3_16881 N
TRIUR3_33737 Triticum urartu TRIUR3_33737 N
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N