e_gw.745.2.1 (Branchiostoma floridae)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 e_gw.745.2.1 T314469_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.745.2.1 Pipsqueak 12 55

Links

Other Pipsqueak family TFs
Other Branchiostoma floridae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29706.m001281 Ricinus communis 29706.m001281 N
Aquca_076_00075 Aquilegia coerulea Aquca_076_00075 N
cassava2753.m1 Manihot esculenta cassava2753.m1 N
cassava34800.m1 Manihot esculenta cassava34800.m1 N
Ca_10004 Cicer arietinum Ca_10004 N
chr5.CM0569.130.nd Lotus japonicus chr5.CM0569.130.nd N
Ciclev10027413m.g Citrus clementina Ciclev10027413m.g N
Cucsa.360250 Cucumis sativus Cucsa.360250 N
evm.TU.supercontig_25.124 Carica papaya evm.TU.supercontig_25.124 N
gene25548-v1.0-hybrid Fragaria vesca gene25548-v1.0-hybrid N
GLYMA07G04430 Glycine max GLYMA07G04430 N
GLYMA16G01020 Glycine max GLYMA16G01020 N
Gorai.011G058900 Gossypium raimondii Gorai.011G058900 N
Lus10000532.g Linum usitatissimum Lus10000532.g N
MDP0000308434 Malus domestica MDP0000308434 N
MTR_8g020840 Medicago truncatula MTR_8g020840 N
orange1.1g008559m.g Citrus sinensis orange1.1g008559m.g N
PGSC0003DMG400039263 Solanum tuberosum PGSC0003DMG400039263 N
PK20670.1 Cannabis sativa PK20670.1 N
Pm013263 Prunus mume Pm013263 N
POPTR_0001s16890 Populus trichocarpa POPTR_0001s16890 N
POPTR_0003s06380 Populus trichocarpa POPTR_0003s06380 N
SapurV1A.0002s0940 Salix purpurea SapurV1A.0002s0940 N
Solyc03g123400.1 Solanum lycopersicum Solyc03g123400.1 N
TCM_029136 Theobroma cacao TCM_029136 N
VIT_09s0002g01190 Vitis vinifera VIT_09s0002g01190 N