Alligator_sinensis_CCG021849.1 (Alligator sinensis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Alligator_sinensis_CCG021849.1 T317741_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG021849.1 Rel 61 190
Alligator_sinensis_CCG021849.1 Rel 586 676

Links

Other Rel family TFs
Other Alligator sinensis TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29912.m005337 Ricinus communis 29912.m005337 I
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I
AT5G56960 Arabidopsis thaliana AT5G56960 I
Bo2g032920 Brassica oleracea Bo2g032920 I
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I
Carubv10026331m.g Capsella rubella Carubv10026331m.g I
cassava25701.m1 Manihot esculenta cassava25701.m1 I
cassava46879.m1 Manihot esculenta cassava46879.m1 I
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I
Cla017100 Citrullus lanatus Cla017100 I
Cucsa.117060 Cucumis sativus Cucsa.117060 I
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I
GLYMA09G07391 Glycine max GLYMA09G07391 I
GLYMA15G18580 Glycine max GLYMA15G18580 I
GRMZM2G175480 Zea mays GRMZM2G175480 N
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I
GSMUA_Achr7G09080_001 Musa acuminata GSMUA_Achr7G09080_001 N
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I
MDP0000119495 Malus domestica MDP0000119495 I
MDP0000252899 Malus domestica MDP0000252899 I
MDP0000782908 Malus domestica MDP0000782908 I
mgf018190m Mimulus guttatus mgf018190m I
OPUNC05G05910 Oryza punctata OPUNC05G05910 I
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I
Pavir.J01638 Panicum virgatum Pavir.J01638 I
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I
PK15505.1 Cannabis sativa PK15505.1 D
Pm027191 Prunus mume Pm027191 I
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I
Si024546m.g Setaria italica Si024546m.g I
TCM_037645 Theobroma cacao TCM_037645 I
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I