cassava25701.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava25701.m1 T048011_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.853 0.708
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava25701.m1 bHLH 317 365

Links

Other bHLH family TFs
Other Manihot esculenta TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.887
29912.m005337 Ricinus communis 29912.m005337 I 0.887
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.887
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.875
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.866
MDP0000119495 Malus domestica MDP0000119495 I 0.866
Si024546m.g Setaria italica Si024546m.g I 0.866
MDP0000252899 Malus domestica MDP0000252899 I 0.866
Pavir.J01638 Panicum virgatum Pavir.J01638 I 0.866
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I 0.866
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.865
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I 0.865
Pm027191 Prunus mume Pm027191 I 0.865
Cla017100 Citrullus lanatus Cla017100 I 0.865
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.865
MDP0000782908 Malus domestica MDP0000782908 I 0.865
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.865
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I 0.865
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I 0.865
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.865
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I 0.865
Carubv10026331m.g Capsella rubella Carubv10026331m.g I 0.865
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I 0.865
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.865
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.865
Bra035639 Brassica rapa Bra035639 I 0.865
AT5G56960 Arabidopsis thaliana AT5G56960 I 0.865
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I 0.865
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I 0.857
AMTR_s00064p00208400 Amborella trichopoda AMTR_s00064p00208400 I 0.856
OB05G15870 Oryza brachyantha OB05G15870 I 0.854
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.854
OBART05G06380 Oryza barthii OBART05G06380 I 0.854
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.854
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.854
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I 0.854
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.854
OS05G0199800 Oryza sativa OS05G0199800 I 0.854
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.854
Bo2g032920 Brassica oleracea Bo2g032920 I 0.853
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.853
GLYMA09G07391 Glycine max GLYMA09G07391 I 0.853
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I 0.853
PK15505.1 Cannabis sativa PK15505.1 D 0.853
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I 0.853
GLYMA15G18580 Glycine max GLYMA15G18580 I 0.853
Sb09g006196 Sorghum bicolor Sb09g006196 N 0.842
mgf018190m Mimulus guttatus mgf018190m I 0.840
Lus10017152.g Linum usitatissimum Lus10017152.g N 0.840