Ogr05554 (Ophisaurus gracilis)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Ogr05554 T322170_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DEAF1
M11266_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_01 		0.991 0.934
DEAF1
M11267_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_02 		0.991 0.934
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr05554 SAND 122 197

Links

Other SAND family TFs
Other Ophisaurus gracilis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G50680 Arabidopsis thaliana AT1G50680 I
AT1G51120 Arabidopsis thaliana AT1G51120 D
Bo5g081270 Brassica oleracea Bo5g081270 I
Bo6g022280 Brassica oleracea Bo6g022280 I
Bo6g022450 Brassica oleracea Bo6g022450 I
Bo6g022460 Brassica oleracea Bo6g022460 I
Bo6g024770 Brassica oleracea Bo6g024770 I
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I
Bra018854 Brassica rapa Bra018854 I
Bra018869 Brassica rapa Bra018869 I
Bra030458 Brassica rapa Bra030458 I
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I
Carubv10011257m.g Capsella rubella Carubv10011257m.g I
Carubv10011592m.g Capsella rubella Carubv10011592m.g I
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I
TCM_040397 Theobroma cacao TCM_040397 I
Thhalv10012161m.g Eutrema salsugineum Thhalv10012161m.g I
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I