OMERI09G11520 (Oryza meridionalis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OMERI09G11520 T322831_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.931 0.730
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.920 0.635
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.905 0.662
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.905 0.662
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.905 0.662
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.888 0.649
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI09G11520.1 SBP 59 132

Links

Other SBP family TFs
Other Oryza meridionalis TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28211.m000132 Ricinus communis 28211.m000132 I 0.913
29269.m000250 Ricinus communis 29269.m000250 I 0.967
29889.m003388 Ricinus communis 29889.m003388 I 0.911
30076.m004574 Ricinus communis 30076.m004574 I 0.920
30174.m008805 Ricinus communis 30174.m008805 I 0.899
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.953
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.898
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.926
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.965
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.914
SPL1 Arabidopsis thaliana AT2G47070 D 0.905
SPL12 Arabidopsis thaliana AT3G60030 D 0.888
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.890
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.901
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.972
Bo4g005730 Brassica oleracea Bo4g005730 I 0.911
Bo4g015800 Brassica oleracea Bo4g015800 I 0.896
Bo4g191350 Brassica oleracea Bo4g191350 I 0.901
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.911
Bostr.25993s0559 Boechera stricta Bostr.25993s0559 I 0.896
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.922
Bra004674 Brassica rapa Bra004674 I 0.896
Bra016891 Brassica rapa Bra016891 I 0.901
Bra041037 Brassica rapa Bra041037 I 0.911
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.919
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.972
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.974
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.918
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.922
Carubv10016658m.g Capsella rubella Carubv10016658m.g I 0.911
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.909
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I 0.894
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.920
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.909
Ca_03548 Cicer arietinum Ca_03548 I 0.920
Ca_07299 Cicer arietinum Ca_07299 I 0.962
Ca_10879 Cicer arietinum Ca_10879 I 0.903
Ca_16243 Cicer arietinum Ca_16243 I 0.887
Ca_24655 Cicer arietinum Ca_24655 I 0.895
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I 0.886
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.887
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.908
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.909
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.891
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.962
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.889
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.920
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.890
Cla021411 Citrullus lanatus Cla021411 I 0.889
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.967
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.930
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.931
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.920
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.967
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.915
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.943
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.909
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.905
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.902
F775_10743 Aegilops tauschii F775_10743 I 0.978
F775_31139 Aegilops tauschii F775_31139 I 0.919
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.931
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.916
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.968
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.911
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.898
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.912
GLYMA02G30670 Glycine max GLYMA02G30670 I 0.944
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.963
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.887
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.909
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.912
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.903
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.887
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.911
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.941
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.963
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.964
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.944
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.904
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.898
Gorai.007G362000 Gossypium raimondii Gorai.007G362000 I 0.899
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.920
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.914
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.980
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.929
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.967
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.978
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.919
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.925
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.968
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.926
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.895
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.910
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.914
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.972
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.956
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.968
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.971
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.944
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.972
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.919
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.925
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.962
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.984
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.920
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.920
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.942
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.942
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.954
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.954
MDP0000156994 Malus domestica MDP0000156994 I 0.906
MDP0000180408 Malus domestica MDP0000180408 I 0.909
MDP0000180409 Malus domestica MDP0000180409 I 0.894
MDP0000262141 Malus domestica MDP0000262141 I 0.903
MDP0000297978 Malus domestica MDP0000297978 I 0.953
MDP0000589558 Malus domestica MDP0000589558 I 0.891
MDP0000861601 Malus domestica MDP0000861601 I 0.906
MDP0000919693 Malus domestica MDP0000919693 I 0.917
MDP0000919694 Malus domestica MDP0000919694 I 0.910
mgf001202m Mimulus guttatus mgf001202m I 0.888
mgf001295m Mimulus guttatus mgf001295m I 0.943
mgf009459m Mimulus guttatus mgf009459m I 0.917
mgf012995m Mimulus guttatus mgf012995m I 0.956
mgf025134m Mimulus guttatus mgf025134m I 0.927
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.919
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.968
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.919
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.957
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.906
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.887
OB03G47050 Oryza brachyantha OB03G47050 I 0.921
OB04G27960 Oryza brachyantha OB04G27960 I 0.892
OB08G26920 Oryza brachyantha OB08G26920 I 0.971
OB08G27190 Oryza brachyantha OB08G27190 I 0.910
OB09G21350 Oryza brachyantha OB09G21350 N 0.973
OBART03G39900 Oryza barthii OBART03G39900 I 0.921
OBART04G20940 Oryza barthii OBART04G20940 I 0.890
OBART07G15570 Oryza barthii OBART07G15570 I 0.901
OBART08G20010 Oryza barthii OBART08G20010 N 0.886
OBART09G14800 Oryza barthii OBART09G14800 I 0.987
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.921
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.890
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.901
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.974
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.987
OLONG_015903 Oryza longistaminata OLONG_015903 N 0.927
OLONG_020138 Oryza longistaminata OLONG_020138 N 0.886
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.921
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.890
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.901
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.921
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.890
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.901
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.974
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.987
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.921
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.921
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.890
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.974
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.987
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.920
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.890
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.899
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.891
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.962
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.921
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.890
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.974
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.987
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.921
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.890
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.901
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.974
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.987
SPL6 Oryza sativa OS03G0833300 I 0.921
SPL7 Oryza sativa OS04G0551500 I 0.890
SPL14 Oryza sativa OS08G0509600 I 0.974
OS09G0491532 Oryza sativa OS09G0491532 I 0.972
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.976
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.969
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.929
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.929
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.976
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.920
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.922
PK06791.1 Cannabis sativa PK06791.1 D 0.920
PK11310.1 Cannabis sativa PK11310.1 I 0.937
PK18312.1 Cannabis sativa PK18312.1 I 0.968
Pm002693 Prunus mume Pm002693 I 0.953
Pm007035 Prunus mume Pm007035 I 0.939
Pm008474 Prunus mume Pm008474 I 0.890
Pm008475 Prunus mume Pm008475 I 0.890
Pm017778 Prunus mume Pm017778 I 0.911
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.918
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.898
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.925
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.917
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.899
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.925
PRUPE_ppa000690mg Prunus persica PRUPE_ppa000690mg I 0.890
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.909
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.953
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.953
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.911
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.911
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.925
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.959
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.899
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.917
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.925
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.916
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.929
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.984
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.982
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.927
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.910
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.910
Si013870m.g Setaria italica Si013870m.g I 0.969
Si030195m.g Setaria italica Si030195m.g I 0.976
Si034095m.g Setaria italica Si034095m.g I 0.929
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.920
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.922
TCM_004922 Theobroma cacao TCM_004922 I 0.919
TCM_005620 Theobroma cacao TCM_005620 I 0.903
TCM_021482 Theobroma cacao TCM_021482 I 0.909
TCM_024873 Theobroma cacao TCM_024873 I 0.967
TCM_031595 Theobroma cacao TCM_031595 I 0.914
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.918
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.919
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.917
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.954
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.919
Traes_7DS_E2A582546 Triticum aestivum Traes_7DS_E2A582546 N 0.923
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.983
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.919
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.909
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.920
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.967
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.903
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.912