Cagra.8874s0008 (Capsella grandiflora)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Cagra.8874s0008 T323409_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.983 0.933
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.983 0.933
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.977 0.933
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.8874s0008.1.p SBP 176 250
Cagra.8874s0008.2.p SBP 176 250
Cagra.8874s0008.3.p SBP 139 213
Cagra.8874s0008.4.p SBP 139 213

Links

Other SBP family TFs
Other Capsella grandiflora TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI06326 Xenopus laevis AAI06326 I 0.000
Aan_R003641 Calypte anna Aan_R003641 I 0.000
Aan_R009566 Calypte anna Aan_R009566 I 0.000
AAP78771 Xenopus laevis AAP78771 I 0.000
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.000
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.000
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.000
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.000
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.000
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.000
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.000
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.000
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.000
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.000
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.000
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.000
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.000
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.000
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.000
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.000
UBP1 Bos taurus ENSBTAG00000003968 I 0.000
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.000
TFCP2 Bos taurus ENSBTAG00000019312 I 0.000
UBP1 Canis familiaris ENSCAFG00000004598 I 0.000
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.000
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.000
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.000
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.000
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.000
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.000
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.000
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.000
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.000
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.000
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.000
ubp1 Danio rerio ENSDARG00000018000 I 0.000
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.000
tfcp2 Danio rerio ENSDARG00000060306 I 0.000
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.000
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.000
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.000
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.000
UBP1 Equus caballus ENSECAG00000018555 I 0.000
TFCP2 Equus caballus ENSECAG00000020650 I 0.000
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.000
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.000
UBP1 Echinops telfairi ENSETEG00000016510 I 0.000
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.000
UBP1 Felis catus ENSFCAG00000006123 I 0.000
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.000
TFCP2 Felis catus ENSFCAG00000030292 I 0.000
TFCP2L1 Homo sapiens ENSG00000115112 D 0.000
TFCP2 Homo sapiens ENSG00000135457 D 0.000
UBP1 Homo sapiens ENSG00000153560 D 0.000
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.000
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.000
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.000
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.000
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.000
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.000
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.000
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.000
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.000
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.000
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.000
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.000
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.000
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.000
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.000
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.000
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.000
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.000
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.000
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.000
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.000
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.000
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.000
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.000
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.000
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.000
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.000
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.000
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.000
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.000
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.000
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.000
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.000
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.000
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.000
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.000
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.000
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.000
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.000
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.000
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.000
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.000
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.000
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.000
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.000
ubp1 Oryzias latipes ENSORLG00000011706 I 0.000
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.000
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.000
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.000
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.000
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.000
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.000
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.000
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.000
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.000
UBP1 Procavia capensis ENSPCAG00000008237 I 0.000
ENSPFOG00000001485 Poecilia formosa ENSPFOG00000001485 N 0.000
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.000
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.000
ENSPFOG00000014602 Poecilia formosa ENSPFOG00000014602 N 0.000
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.000
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.000
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.000
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.000
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.000
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.000
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.000
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.000
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.000
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.000
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.000
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.000
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.000
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.000
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.000
UBP1 Sorex araneus ENSSARG00000008670 I 0.000
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.000
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.000
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.000
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.000
UBP1 Sus scrofa ENSSSCG00000011235 I 0.000
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.000
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.000
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.000
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.000
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.000
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.000
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.000
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.000
tfcp2l1 Tetraodon nigroviridis ENSTNIG00000017829 N 0.000
tfcp2l1 Takifugu rubripes ENSTRUG00000002438 N 0.000
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.000
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.000
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.000
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.000
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.000
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.000
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.000
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.000
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.000
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.000
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.000
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.000
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.000
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.000
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.000
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.000
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.000
Tal_R010177 Tyto alba Tal_R010177 I 0.000
Tal_R011103 Tyto alba Tal_R011103 I 0.000
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.000
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.000
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.000
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.000