OGLUM05G29230 (Oryza glumaepatula)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OGLUM05G29230 T323896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G29230.1 Sigma 70 249 315

Links

Other Sigma 70 family TFs
Other Oryza glumaepatula TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R003683 Aptenodytes forsteri Afo_R003683 N
Alligator_sinensis_CCG010969.1 Alligator sinensis Alligator_sinensis_CCG010969.1 N
PRDM1 Anolis carolinensis ENSACAG00000005496 N
ENSAPLG00000013593 Anas platyrhynchos ENSAPLG00000013593 N
PRDM1 Bos taurus ENSBTAG00000000816 N
ZNF683 Bos taurus ENSBTAG00000009631 N
ENSBTAP00000001081-D1 Bos grunniens ENSBTAP00000001081-D1 N
ENSBTAP00000012691-D1 Bos grunniens ENSBTAP00000012691-D1 N
ZNF683 Canis familiaris ENSCAFG00000012496 N
prdm1a Danio rerio ENSDARG00000002445 N
ZNF683 Dasypus novemcinctus ENSDNOG00000043822 N
ENSFALG00000011624 Ficedula albicollis ENSFALG00000011624 N
ZNF683 Felis catus ENSFCAG00000012809 N
prdm1a Gasterosteus aculeatus ENSGACG00000001740 N
ENSGACG00000009358 Gasterosteus aculeatus ENSGACG00000009358 N
ENSGALG00000015388 Gallus gallus ENSGALG00000015388 N
ENSGMOG00000009730 Gadus morhua ENSGMOG00000009730 N
ENSGMOG00000010670 Gadus morhua ENSGMOG00000010670 N
ENSLOCG00000016531 Lepisosteus oculatus ENSLOCG00000016531 N
PRDM1 Meleagris gallopavo ENSMGAG00000013524 N
ZNF683 Microcebus murinus ENSMICG00000010832 N
ZNF683 Myotis lucifugus ENSMLUG00000015261 N
ENSOARG00000004628 Ovis aries ENSOARG00000004628 N
ENSOARG00000011272 Ovis aries ENSOARG00000011272 N
ENSONIG00000006687 Oreochromis niloticus ENSONIG00000006687 N
prdm1a Oryzias latipes ENSORLG00000015684 N
ZNF683 Procavia capensis ENSPCAG00000010624 N
PRDM1 Taeniopygia guttata ENSTGUG00000012204 N
prdm1 Takifugu rubripes ENSTRUG00000000404 N
estExt_fgenesh2_pg.C_440053 Branchiostoma floridae estExt_fgenesh2_pg.C_440053 N
estExt_fgenesh2_pg.C_440063 Branchiostoma floridae estExt_fgenesh2_pg.C_440063 N
Myotis_brandtii_ZNF683_10029662 Myotis brandtii Myotis_brandtii_ZNF683_10029662 N
Ogr18550 Ophisaurus gracilis Ogr18550 N
Pvit_09291 Pogona vitticeps Pvit_09291 N
XP_002937203 Xenopus tropicalis XP_002937203 N