Eucgr.C00620 (Eucalyptus grandis)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Eucgr.C00620 T324177_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00620.1 Sigma 70 322 392
Eucgr.C00620.2 Sigma 70 322 392
Eucgr.C00620.3 Sigma 70 322 392

Links

Other Sigma 70 family TFs
Other Eucalyptus grandis TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004255 Aedes aegypti AAEL004255 I
AAEL013770 Aedes aegypti AAEL013770 I
AATE010559 Anopheles atroparvus AATE010559 I
ACEP26221 Atta cephalotes ACEP26221 I
ACOM039487 Anopheles coluzzii ACOM039487 I
ACUA020082 Anopheles culicifacies ACUA020082 I
ACYPI000849 Acyrthosiphon pisum ACYPI000849 I
ADAC005262 Anopheles darlingi ADAC005262 I
AFAF006673 Anopheles farauti AFAF006673 I
AGAP006592 Anopheles gambiae AGAP006592 I
AMEC005588 Anopheles melas AMEC005588 I
AMEM000073 Anopheles merus AMEM000073 I
ASIS005657 Anopheles sinensis ASIS005657 I
ASU_05469 Ascaris suum ASU_05469 I
BGIBMGA000319 Bombyx mori BGIBMGA000319 I
Bm3574 Brugia malayi Bm3574 I
BTMF_0000836601 Brugia timori BTMF_0000836601 I
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I
CapteG226252 Capitella teleta CapteG226252 I
Cflo_04377--XP_391847.3_APIME Camponotus floridanus Cflo_04377--XP_391847.3_APIME I
CGI_10024223 Crassostrea gigas CGI_10024223 I
CLEC009125 Cimex lectularius CLEC009125 I
CPIJ007425 Culex quinquefasciatus CPIJ007425 I
CpipJ_CPIJ007425 Culex pipiens CpipJ_CPIJ007425 I
D917_07972 Trichinella nativa D917_07972 I
D918_01175 Trichuris suis D918_01175 I
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I
DME_0000608401 Dracunculus medinensis DME_0000608401 I
EFV52614 Trichinella spiralis EFV52614 I
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I
Blimp-1 Drosophila melanogaster FBgn0035625 D
GF23985 Drosophila ananassae FBgn0100979 I
GG15278 Drosophila erecta FBgn0107530 I
GH16462 Drosophila grimshawi FBgn0123933 I
GM14713 Drosophila sechellia FBgn0169634 I
GJ13412 Drosophila virilis FBgn0200637 I
GK17303 Drosophila willistoni FBgn0219302 I
GE21501 Drosophila yakuba FBgn0238758 I
GA23469 Drosophila pseudoobscura FBgn0244871 I
GB51060 Apis mellifera GB51060 I
HHAL002221-PA Halyomorpha halys HHAL002221-PA I
HMEL007072 Heliconius melpomene HMEL007072 I
KGM_16647 Danaus plexippus KGM_16647 I
L596_g21750 Steinernema carpocapsae L596_g21750 I
L798_14234 Zootermopsis nevadensis L798_14234 I
L889_g7623 Steinernema feltiae L889_g7623 I
L892_g2443 Steinernema scapterisci L892_g2443 I
L893_g23908 Steinernema glaseri L893_g23908 I
L898_g18820 Steinernema monticolum L898_g18820 I
LCUP008191 Lucilia cuprina LCUP008191 I
LDEC016433 Leptinotarsa decemlineata LDEC016433 I
LOAG_11444 Loa loa LOAG_11444 I
LotgiG86198 Lottia gigantea LotgiG86198 I
MCINX009345 Melitaea cinxia MCINX009345 I
MDOA000384 Musca domestica MDOA000384 I
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I
NV12817 Nasonia vitripennis NV12817 I
PHUM607020 Pediculus humanus PHUM607020 I
PPAI008567 Phlebotomus papatasi PPAI008567 I
RPRC001983 Rhodnius prolixus RPRC001983 I
SINV14078 Solenopsis invicta SINV14078 I
SMAR011793 Strigamia maritima SMAR011793 I
SMUV_0001104401 Syphacia muris SMUV_0001104401 I
SPAL_0000884500 Strongyloides papillosus SPAL_0000884500 I
SSTP_0000757300 Strongyloides stercoralis SSTP_0000757300 I
SVE_1713000 Strongyloides venezuelensis SVE_1713000 I
TC014741 Tribolium castaneum TC014741 I
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I
TCNE_0001220201 Toxocara canis TCNE_0001220201 I
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I
WBGene00238199 Onchocerca volvulus WBGene00238199 I
WUBG_04696 Wuchereria bancrofti WUBG_04696 I