Cmyd_10013581 (Chelonia mydas)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Cmyd_10013581 T325287_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.849 0.849
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.849 0.849
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.849 0.849
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.849 0.849
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.849 0.849
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.849 0.849
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.849 0.849
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.849 0.849
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.712 0.712
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.712 0.712
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.712 0.712
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.712 0.712
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.712 0.712
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.712 0.712
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.712 0.712
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.712 0.712
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10013581 SMAD 7 83

Links

Other SMAD family TFs
Other Chelonia mydas TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB39329 Xenopus laevis AAB39329 I 0.822
AAEL005513 Aedes aegypti AAEL005513 I 0.712
AALB000402 Anopheles albimanus AALB000402 I 0.712
Aan_R002236 Calypte anna Aan_R002236 I 0.822
Aan_R005227 Calypte anna Aan_R005227 I 0.712
Aan_R005610 Calypte anna Aan_R005610 I 0.877
AARA011030 Anopheles arabiensis AARA011030 I 0.712
AATE020501 Anopheles atroparvus AATE020501 I 0.712
ACHR005633 Anopheles christyi ACHR005633 I 0.712
ACUA017601 Anopheles culicifacies ACUA017601 I 0.712
ACUA022001 Anopheles culicifacies ACUA022001 I 0.712
ADAC002355 Anopheles darlingi ADAC002355 I 0.712
ADIR010877 Anopheles dirus ADIR010877 I 0.712
AEPI001857 Anopheles epiroticus AEPI001857 I 0.712
Afo_R003117 Aptenodytes forsteri Afo_R003117 I 0.712
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.877
AFUN010580 Anopheles funestus AFUN010580 I 0.712
AGAP008551 Anopheles gambiae AGAP008551 I 0.712
Alligator_sinensis_CCG004626.1 Alligator sinensis Alligator_sinensis_CCG004626.1 I 0.853
Alligator_sinensis_CCG012577.1 Alligator sinensis Alligator_sinensis_CCG012577.1 I 0.712
AMAM023956 Anopheles maculatus AMAM023956 I 0.712
AMEC005585 Anopheles melas AMEC005585 I 0.712
AMEM010864 Anopheles merus AMEM010864 I 0.712
AMIN001006 Anopheles minimus AMIN001006 I 0.712
AQUA000239 Anopheles quadriannulatus AQUA000239 I 0.712
ASTEI05192 Anopheles stephensi ASTEI05192 I 0.712
Brh_R001115 Buceros rhinoceros Brh_R001115 I 1.000
Brh_R009512 Buceros rhinoceros Brh_R009512 I 0.712
CapteG167863 Capitella teleta CapteG167863 I 0.740
CGI_10014747 Crassostrea gigas CGI_10014747 I 0.712
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.726
CLEC006591 Cimex lectularius CLEC006591 I 0.712
CPIJ000420 Culex quinquefasciatus CPIJ000420 I 0.712
CpipJ_CPIJ000420 Culex pipiens CpipJ_CPIJ000420 I 0.712
D918_06928 Trichuris suis D918_06928 I 0.740
DAPPUDRAFT_300607 Daphnia pulex DAPPUDRAFT_300607 I 0.726
SMAD9 Anolis carolinensis ENSACAG00000004463 I 0.712
SMAD3 Anolis carolinensis ENSACAG00000009914 I 0.877
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.836
ENSAMEG00000014442 Ailuropoda melanoleuca ENSAMEG00000014442 I 0.712
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.795
ENSAMXG00000016040 Astyanax mexicanus ENSAMXG00000016040 I 0.712
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.922
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I 1.000
ENSAPLG00000009135 Anas platyrhynchos ENSAPLG00000009135 I 0.712
SMAD9 Bos taurus ENSBTAG00000007589 I 0.712
SMAD3 Bos taurus ENSBTAG00000012599 I 0.863
ENSBTAP00000029021-D3 Bos grunniens ENSBTAP00000029021-D3 I 0.712
SMAD9 Canis familiaris ENSCAFG00000006162 I 0.712
SMAD1 Choloepus hoffmanni ENSCHOG00000009259 I 0.712
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.849
ENSCSAG00000017872 Chlorocebus sabaeus ENSCSAG00000017872 I 0.712
smad3a Danio rerio ENSDARG00000036096 I 0.808
SMAD9 Dasypus novemcinctus ENSDNOG00000048385 I 0.726
Smad9 Dipodomys ordii ENSDORG00000002526 I 0.712
SMAD9 Equus caballus ENSECAG00000012534 I 0.712
SMAD3 Equus caballus ENSECAG00000020259 I 0.822
ENSETEG00000017446 Echinops telfairi ENSETEG00000017446 I 0.844
SMAD9 Echinops telfairi ENSETEG00000020236 I 0.712
ENSFALG00000008280 Ficedula albicollis ENSFALG00000008280 I 0.712
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.863
SMAD9 Felis catus ENSFCAG00000003813 I 0.712
SMAD3 Felis catus ENSFCAG00000027081 I 0.849
SMAD9 Homo sapiens ENSG00000120693 D 0.712
SMAD3 Homo sapiens ENSG00000166949 D 0.953
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.781
smad1 Gasterosteus aculeatus ENSGACG00000017230 I 0.712
smad5 Gasterosteus aculeatus ENSGACG00000018718 I 0.726
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.877
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 0.822
SMAD9 Gallus gallus ENSGALG00000017050 I 0.712
SMAD9 Gorilla gorilla ENSGGOG00000001017 I 0.712
ENSLACG00000010552 Latimeria chalumnae ENSLACG00000010552 I 0.968
ENSLACG00000011178 Latimeria chalumnae ENSLACG00000011178 I 0.712
SMAD9 Loxodonta africana ENSLAFG00000002903 I 0.712
ENSLOCG00000008877 Lepisosteus oculatus ENSLOCG00000008877 I 0.726
ENSMEUG00000007556 Macropus eugenii ENSMEUG00000007556 I 0.712
ENSMEUG00000016668 Macropus eugenii ENSMEUG00000016668 I 0.836
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.922
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I 1.000
SMAD9 Meleagris gallopavo ENSMGAG00000015060 I 0.712
SMAD9 Microcebus murinus ENSMICG00000003343 I 0.712
SMAD3 Myotis lucifugus ENSMLUG00000002185 I 0.836
SMAD9 Myotis lucifugus ENSMLUG00000006399 I 0.712
SMAD9 Macaca mulatta ENSMMUG00000009914 I 0.712
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.849
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.863
SMAD9 Monodelphis domestica ENSMODG00000010017 I 0.712
ENSMPUG00000000304 Mustela putorius furo ENSMPUG00000000304 I 0.863
ENSMPUG00000001838 Mustela putorius furo ENSMPUG00000001838 I 0.712
Smad9 Mus musculus ENSMUSG00000027796 D 0.712
Smad3 Mus musculus ENSMUSG00000032402 D 0.873
ENSNLEG00000001639 Nomascus leucogenys ENSNLEG00000001639 I 0.712
SMAD5 Ornithorhynchus anatinus ENSOANG00000009906 I 0.712
SMAD9 Ornithorhynchus anatinus ENSOANG00000015497 I 0.712
ENSOARG00000018276 Ovis aries ENSOARG00000018276 I 0.955
SMAD9 Oryctolagus cuniculus ENSOCUG00000007453 I 0.712
SMAD9 Otolemur garnettii ENSOGAG00000002742 I 0.712
ENSONIG00000010000 Oreochromis niloticus ENSONIG00000010000 I 0.712
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.781
SMAD9 Ochotona princeps ENSOPRG00000004923 I 0.712
SMAD1 Ochotona princeps ENSOPRG00000012775 I 0.712
smad1 Oryzias latipes ENSORLG00000007377 I 0.712
smad5 Oryzias latipes ENSORLG00000009395 I 0.712
ENSP00000382216 Macaca fascicularis ENSP00000382216 I 0.712
ENSPANG00000014460 Papio anubis ENSPANG00000014460 I 0.712
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.849
SMAD9 Procavia capensis ENSPCAG00000002604 I 0.712
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.849
ENSPFOG00000005752 Poecilia formosa ENSPFOG00000005752 I 0.726
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.808
ENSPFOG00000024550 Poecilia formosa ENSPFOG00000024550 I 0.712
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I 0.873
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I 0.712
ENSPSIG00000002483 Pelodiscus sinensis ENSPSIG00000002483 I 0.712
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I 1.000
SMAD9 Pan troglodytes ENSPTRG00000005788 I 0.712
SMAD9 Pteropus vampyrus ENSPVAG00000013871 I 0.712
Smad9 Rattus norvegicus ENSRNOG00000000091 D 0.712
LOC103691556 Rattus norvegicus ENSRNOG00000058416 I 0.712
SMAD9 Sorex araneus ENSSARG00000011878 I 0.712
ENSSHAG00000001186 Sarcophilus harrisii ENSSHAG00000001186 I 0.712
ENSSHAG00000012543 Sarcophilus harrisii ENSSHAG00000012543 I 0.863
SMAD3 Sus scrofa ENSSSCG00000004952 I 0.836
SMAD9 Sus scrofa ENSSSCG00000009357 I 0.712
ENSSTOG00000007103 Ictidomys tridecemlineatus ENSSTOG00000007103 I 0.712
ENSSTOG00000010836 Ictidomys tridecemlineatus ENSSTOG00000010836 I 0.712
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I 0.849
SMAD9 Tupaia belangeri ENSTBEG00000011491 I 0.712
SMAD3 Taeniopygia guttata ENSTGUG00000009470 I 0.849
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.808
smad1 Tetraodon nigroviridis ENSTNIG00000017720 I 0.712
ENSTRUG00000002512 Takifugu rubripes ENSTRUG00000002512 I 0.781
smad1 Takifugu rubripes ENSTRUG00000014344 I 0.712
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.781
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.808
ENSTSYG00000005021 Tarsius syrichta ENSTSYG00000005021 I 0.712
SMAD9 Tursiops truncatus ENSTTRG00000007903 I 0.712
ENSXMAG00000009618 Xiphophorus maculatus ENSXMAG00000009618 I 0.712
ENSXMAG00000016280 Xiphophorus maculatus ENSXMAG00000016280 I 0.726
Mad Drosophila melanogaster FBgn0011648 D 0.712
GF20577 Drosophila ananassae FBgn0097583 I 0.712
GG24457 Drosophila erecta FBgn0116589 I 0.712
GH10284 Drosophila grimshawi FBgn0117765 I 0.712
GI17981 Drosophila mojavensis FBgn0140721 I 0.712
GL26531 Drosophila persimilis FBgn0164113 I 0.712
GM18164 Drosophila sechellia FBgn0173071 I 0.712
GD22774 Drosophila simulans FBgn0194168 I 0.712
GJ19553 Drosophila virilis FBgn0206695 I 0.712
GK18268 Drosophila willistoni FBgn0220267 I 0.712
GE14935 Drosophila yakuba FBgn0232525 I 0.712
GA28973 Drosophila pseudoobscura FBgn0250331 I 0.712
GB42213 Apis mellifera GB42213 N 0.710
Gfo_R005758 Geospiza fortis Gfo_R005758 I 0.712
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.863
HelroG186716 Helobdella robusta HelroG186716 I 0.726
HMEL009295 Heliconius melpomene HMEL009295 I 0.712
ISCW001846 Ixodes scapularis ISCW001846 I 0.781
KGM_04785 Danaus plexippus KGM_04785 I 0.712
L798_14024 Zootermopsis nevadensis L798_14024 I 0.753
LLOJ009024 Lutzomyia longipalpis LLOJ009024 I 0.712
MDOA012257 Musca domestica MDOA012257 I 0.712
MDOA015236 Musca domestica MDOA015236 I 0.712
Myotis_brandtii_SMAD9_10010468 Myotis brandtii Myotis_brandtii_SMAD9_10010468 I 0.712
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.767
NEMVEDRAFT_v1g228395 Nematostella vectensis NEMVEDRAFT_v1g228395 I 0.712
PPAI007902 Phlebotomus papatasi PPAI007902 I 0.712
Pvit_04328 Pogona vitticeps Pvit_04328 I 0.712
Pvit_04529 Pogona vitticeps Pvit_04529 I 0.863
Sakowv30032201m.g Saccoglossus kowalevskii Sakowv30032201m.g I 0.753
SMAR008230 Strigamia maritima SMAR008230 I 0.795
SMAR012602 Strigamia maritima SMAR012602 I 0.726
Tal_R001210 Tyto alba Tal_R001210 I 1.000
Tal_R004657 Tyto alba Tal_R004657 I 0.712
tetur04g09040 Tetranychus urticae tetur04g09040 I 0.712
TriadG49742 Trichoplax adhaerens TriadG49742 I 0.740
TTRE_0000645601 Trichuris trichiura TTRE_0000645601 I 0.740
smad1.L Xenopus laevis XB-GENE-1018199 I 0.712
smad1.S Xenopus laevis XB-GENE-6253892 I 0.726
smad2.S Xenopus laevis XB-GENE-864923 I 0.808