ubtfl (Gasterosteus aculeatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSGACG00000001504 T328084_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000001967 Sox 113 181
ENSGACP00000001967 Sox 197 265
ENSGACP00000001967 Sox 297 360
ENSGACP00000001967 Sox 466 502
ENSGACP00000001967 Sox 525 592

Links

Other Sox family TFs
Other Gasterosteus aculeatus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1715211A Xenopus laevis 1715211A N 0.548
ubtfl Danio rerio ENSDARG00000038780 N 0.680
ENSGMOG00000009475 Gadus morhua ENSGMOG00000009475 N 0.646
ENSLACG00000008118 Latimeria chalumnae ENSLACG00000008118 N 0.550
ENSLOCG00000010224 Lepisosteus oculatus ENSLOCG00000010224 N 0.525
ENSONIG00000014037 Oreochromis niloticus ENSONIG00000014037 N 0.686
ENSPFOG00000010734 Poecilia formosa ENSPFOG00000010734 N 0.432
ubtfl Tetraodon nigroviridis ENSTNIG00000003066 N 0.648
ubtfl Takifugu rubripes ENSTRUG00000009527 N 0.655
ENSXMAG00000012822 Xiphophorus maculatus ENSXMAG00000012822 N 0.705
ubtf.L Xenopus laevis XB-GENE-6254049 N 0.545