Ocbimv22007316m.g (Octopus bimaculoides)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ocbimv22007316m.g T334310_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22007316m.p Sox 326 354

Links

Other Sox family TFs
Other Octopus bimaculoides TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP25270 Atta cephalotes ACEP25270 N 0.426
Bra012244 Brassica rapa Bra012244 N 0.472
Bra016455 Brassica rapa Bra016455 N 0.472
CaO19.1730 Candida albicans CaO19.1730 N 0.457
CaO19.9298 Candida albicans CaO19.9298 N 0.457
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.488
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.539
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I 0.439
Hbp1 Dipodomys ordii ENSDORG00000010576 I 0.719
HBP1 Echinops telfairi ENSETEG00000018542 I 0.719
HBP1 Homo sapiens ENSG00000105856 D 0.729
BBX Homo sapiens ENSG00000114439 D 0.533
ENSGMOG00000014613 Gadus morhua ENSGMOG00000014613 N 0.678
ENSMEUG00000011116 Macropus eugenii ENSMEUG00000011116 I 0.719
Hbp1 Mus musculus ENSMUSG00000002996 D 0.729
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N 0.456
HBP1 Sorex araneus ENSSARG00000007731 I 0.719
ENSTNIG00000011238 Tetraodon nigroviridis ENSTNIG00000011238 N 0.470
ENSTNIG00000019242 Tetraodon nigroviridis ENSTNIG00000019242 N 0.451
e_gw1.88.21.1 Fragilariopsis cylindrus e_gw1.88.21.1 N 0.446
GH23191 Drosophila grimshawi FBgn0130648 N 0.596
GL20955 Drosophila persimilis FBgn0158550 I 0.439
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N 0.443
GLYMA02G25940 Glycine max GLYMA02G25940 N 0.462
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.472
HelroG148167 Helobdella robusta HelroG148167 I 0.459
L798_04020 Zootermopsis nevadensis L798_04020 N 0.459
L798_09360 Zootermopsis nevadensis L798_09360 N 0.459
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N 0.442
Ogr19131 Ophisaurus gracilis Ogr19131 N 0.729
PPA10381 Pristionchus pacificus PPA10381 N 0.485
PredSwiss_ASS2010_3146.2 Pneumocystis carinii PredSwiss_ASS2010_3146.2 N 0.486
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.456
RO3G_14677 Rhizopus oryzae RO3G_14677 N 0.463
Sjc_0095610 Schistosoma japonicum Sjc_0095610 N 0.456
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.436
SPOG_05006 Schizosaccharomyces cryophilus SPOG_05006 N 0.486
SPU_021407 Strongylocentrotus purpuratus SPU_021407 N 0.587