CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GL20955
(
Drosophila persimilis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0158550
T329682_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.489
0.930
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0185062
Sox
227
269
ARRPMNAFLIFCKRHRAIVKERYKSLENRAITKILGDWWAALG
Links
Other
Sox
family TFs
Other
Drosophila persimilis
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GH23191
Drosophila grimshawi
FBgn0130648
N
0.585
BBX
Homo sapiens
ENSG00000114439
D
0.528
AMEM012787
Anopheles merus
AMEM012787
I
0.516
bbx
Danio rerio
ENSDARG00000012699
I
0.514
ENSSSCG00000025539
Sus scrofa
ENSSSCG00000025539
I
0.514
NECAME_00080
Necator americanus
NECAME_00080
I
0.510
HelroG148142
Helobdella robusta
HelroG148142
I
0.504
DAPPUDRAFT_37735
Daphnia pulex
DAPPUDRAFT_37735
I
0.496
GA16961
Drosophila pseudoobscura
FBgn0076975
I
0.494
GF20922
Drosophila ananassae
FBgn0097927
I
0.494
GI21541
Drosophila mojavensis
FBgn0144271
I
0.494
GJ16014
Drosophila virilis
FBgn0203199
I
0.494
GK25081
Drosophila willistoni
FBgn0227040
I
0.494
LCUP006498
Lucilia cuprina
LCUP006498
I
0.494
MDOA012813
Musca domestica
MDOA012813
I
0.494
ENSLOCG00000004648
Lepisosteus oculatus
ENSLOCG00000004648
I
0.489
bbx
Drosophila melanogaster
FBgn0024251
D
0.489
GG19727
Drosophila erecta
FBgn0111928
I
0.489
GM23082
Drosophila sechellia
FBgn0177950
I
0.489
GE17925
Drosophila yakuba
FBgn0235361
I
0.489
tetur23g01950
Tetranychus urticae
tetur23g01950
I
0.484
EFV48447
Trichinella spiralis
EFV48447
I
0.483
CY34DRAFT_106474
Suillus luteus
CY34DRAFT_106474
N
0.474
HelroG148167
Helobdella robusta
HelroG148167
I
0.471
TMUE_s0148001000
Trichuris muris
TMUE_s0148001000
N
0.468
ISCW010061
Ixodes scapularis
ISCW010061
I
0.463
L798_02329
Zootermopsis nevadensis
L798_02329
I
0.463
BGIBMGA008274
Bombyx mori
BGIBMGA008274
I
0.459
HMEL012996
Heliconius melpomene
HMEL012996
I
0.459
SMAR012744
Strigamia maritima
SMAR012744
I
0.458
NEMVEDRAFT_v1g122926
Nematostella vectensis
NEMVEDRAFT_v1g122926
I
0.457
AFAF016820
Anopheles farauti
AFAF016820
I
0.457
SPER_0000213401
Spirometra erinaceieuropaei
SPER_0000213401
N
0.450
Hsal_01854--XP_624175.2_APIME
Harpegnathos saltator
Hsal_01854--XP_624175.2_APIME
I
0.446
HBP1
Homo sapiens
ENSG00000105856
D
0.445
Hbp1
Mus musculus
ENSMUSG00000002996
D
0.445
SEPMUDRAFT_152382
Sphaerulina musiva
SEPMUDRAFT_152382
N
0.445
Ogr19131
Ophisaurus gracilis
Ogr19131
N
0.445
sox9b
Danio rerio
ENSDARG00000043923
I
0.442
ENSDORG00000003967
Dipodomys ordii
ENSDORG00000003967
I
0.442
ENSDORG00000012440
Dipodomys ordii
ENSDORG00000012440
I
0.442
SOX10
Erinaceus europaeus
ENSEEUG00000011263
I
0.442
ENSFALG00000002572
Ficedula albicollis
ENSFALG00000002572
I
0.442
SOX10
Ochotona princeps
ENSOPRG00000013575
I
0.442
SOX10
Procavia capensis
ENSPCAG00000005913
I
0.442
ENSPMAG00000010371
Petromyzon marinus
ENSPMAG00000010371
I
0.442
SOX9
Pteropus vampyrus
ENSPVAG00000010505
I
0.442
ENSVPAG00000000908
Vicugna pacos
ENSVPAG00000000908
I
0.442
ISCW009925
Ixodes scapularis
ISCW009925
I
0.442
LotgiG88815
Lottia gigantea
LotgiG88815
I
0.442
RPRC012780
Rhodnius prolixus
RPRC012780
I
0.442
TC003791
Tribolium castaneum
TC003791
I
0.442
Hsal_04828--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04828--XP_001122993.1_APIME
I
0.442
XP_002935939
Xenopus tropicalis
XP_002935939
I
0.442
BGLB010904
Biomphalaria glabrata
BGLB010904
I
0.442
BTMF_0001637101
Brugia timori
BTMF_0001637101
I
0.442
ASTEI00827
Anopheles stephensi
ASTEI00827
I
0.441
Hsal_18129--FBpp0074818_DROME
Harpegnathos saltator
Hsal_18129--FBpp0074818_DROME
N
0.439
Ocbimv22007316m.g
Octopus bimaculoides
Ocbimv22007316m.g
N
0.439
AMIN000258
Anopheles minimus
AMIN000258
I
0.438
Hbp1
Dipodomys ordii
ENSDORG00000010576
I
0.435
HBP1
Echinops telfairi
ENSETEG00000018542
I
0.435
ENSMEUG00000011116
Macropus eugenii
ENSMEUG00000011116
I
0.435
HBP1
Sorex araneus
ENSSARG00000007731
I
0.435
CpipJ_CPIJ005582
Culex pipiens
CpipJ_CPIJ005582
I
0.431
AAEL011161
Aedes aegypti
AAEL011161
I
0.431
CPIJ005582
Culex quinquefasciatus
CPIJ005582
I
0.431
AMEC018835
Anopheles melas
AMEC018835
I
0.431
CpipJ_CPIJ014016
Culex pipiens
CpipJ_CPIJ014016
N
0.428
CPIJ014016
Culex quinquefasciatus
CPIJ014016
N
0.428
AARA011914
Anopheles arabiensis
AARA011914
I
0.428
AATE006542
Anopheles atroparvus
AATE006542
N
0.428
ACOM034662
Anopheles coluzzii
ACOM034662
I
0.428
ACUA026266
Anopheles culicifacies
ACUA026266
I
0.428
AMEC016085
Anopheles melas
AMEC016085
I
0.428
AMIN001219
Anopheles minimus
AMIN001219
I
0.428
AQUA004309
Anopheles quadriannulatus
AQUA004309
I
0.428
PPAI009257
Phlebotomus papatasi
PPAI009257
N
0.428
CpipJ_CPIJ014424
Culex pipiens
CpipJ_CPIJ014424
I
0.422
CPIJ014424
Culex quinquefasciatus
CPIJ014424
I
0.422
ASTEI11145
Anopheles stephensi
ASTEI11145
I
0.422
ACEP25270
Atta cephalotes
ACEP25270
N
0.421
L798_04020
Zootermopsis nevadensis
L798_04020
N
0.421
L798_09360
Zootermopsis nevadensis
L798_09360
N
0.421
LotgiG100217
Lottia gigantea
LotgiG100217
I
0.416
TELCIR_02356
Teladorsagia circumcincta
TELCIR_02356
I
0.415