CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TsM_000088100
(
Taenia solium
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TsM_000088100
T337220_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TsM_000088100
Sox
9
79
PKSPLSGFACFVQVIRDKHRSLHPNENVIFNEFAKRCAERWREMPPDKRAPFEEMSRLDTKRYNREMGEYV
TsM_000088100
Sox
132
198
PKRALSAFFFFCDHYRPEVRNAHPEWRVSEVAKELGRLWDECSDKAPYELQAQKDKLRYEEEMRRYK
Links
Other
Sox
family TFs
Other
Taenia solium
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_05510
Schistosoma haematobium
A_05510
N
0.472
csin110255
Clonorchis sinensis
csin110255
N
0.509
D915_00818
Fasciola hepatica
D915_00818
N
0.421
D915_15256
Fasciola hepatica
D915_15256
N
0.509
DILT_0000548601
Diphyllobothrium latum
DILT_0000548601
N
0.637
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.441
ECANG7_05481
Echinococcus canadensis
ECANG7_05481
N
0.736
EmuJ_000768300
Echinococcus multilocularis
EmuJ_000768300
N
0.736
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.461
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.432
HDID_0000408601
Hymenolepis diminuta
HDID_0000408601
N
0.666
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.432
HmN_000813000
Hymenolepis microstoma
HmN_000813000
N
0.679
HNAJ_0000974401
Hymenolepis nana
HNAJ_0000974401
N
0.665
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.432
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.465
MCOS_0000726501
Mesocestoides corti
MCOS_0000726501
N
0.637
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.467
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.428
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.429
SCUD_0000067701
Schistosoma curassoni
SCUD_0000067701
N
0.472
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.429
Smp_103530
Schistosoma mansoni
Smp_103530
N
0.472
SMRZ_0000146101
Schistosoma margrebowiei
SMRZ_0000146101
N
0.472
SMRZ_0001808901
Schistosoma margrebowiei
SMRZ_0001808901
N
0.472
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.429
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.420
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.429
SROB_0001061001
Schistosoma rodhaini
SROB_0001061001
N
0.472
T265_12733
Opisthorchis viverrini
T265_12733
N
0.422
T265_14643
Opisthorchis viverrini
T265_14643
N
0.509
TRE_0000506801
Trichobilharzia regenti
TRE_0000506801
N
0.452
TsM_000115400
Taenia solium
TsM_000115400
N
0.461
TTAC_0000194001
Hydatigera taeniaeformis
TTAC_0000194001
N
0.711
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.441