CERSUDRAFT_97665 (Ceriporiopsis subvermispora)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 CERSUDRAFT_97665 T342196_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.877 0.877
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.877 0.877
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.877 0.877
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.818 0.818
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.818 0.818
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.818 0.818
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.818 0.818
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.818 0.818
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.818 0.818
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.818 0.818
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.818 0.818
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.818 0.818
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD34406 TBP 139 231
EMD34406 TBP 239 309

Links

Other TBP family TFs
Other Ceriporiopsis subvermispora TFs

740 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA037077 Oryza indica BGIOSGA037077 N
BGLB003577 Biomphalaria glabrata BGLB003577 N
Bra032973 Brassica rapa Bra032973 N
CAOG_03637 Capsaspora owczarzaki CAOG_03637 N
CGOC_0000468301 Cylicostephanus goldi CGOC_0000468301 N
EFA80760.1 Polysphondylium pallidum EFA80760.1 N
TRIM56 Anolis carolinensis ENSACAG00000007859 N
BLOC1S6 Loxodonta africana ENSLAFG00000000655 N
Sec61gl Rattus norvegicus ENSRNOG00000049016 N
Sec61g-ps1 Rattus norvegicus ENSRNOG00000049451 N
BLOC1S6 Sorex araneus ENSSARG00000009861 N
GF19613 Drosophila ananassae FBgn0096620 N
GK18872 Drosophila willistoni FBgn0220870 N
GE16904 Drosophila yakuba FBgn0234394 N
fgenesh1_pg.C_scaffold_4001082 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4001082 N
fgenesh2_pg.scaffold_12000136 Monosiga brevicollis fgenesh2_pg.scaffold_12000136 N
H311_00925 Anncaliia algerae H311_00925 N
Hsal_00106--NA Harpegnathos saltator Hsal_00106--NA N
LPERR02G20610 Leersia perrieri LPERR02G20610 N
Lus10019949.g Linum usitatissimum Lus10019949.g N
Lus10042195.g Linum usitatissimum Lus10042195.g N
OB07G12490 Oryza brachyantha OB07G12490 N
OBART02G32430 Oryza barthii OBART02G32430 N
OLONG_002570 Oryza longistaminata OLONG_002570 I
ORUFI11G04600 Oryza rufipogon ORUFI11G04600 N
ORUFI12G05060 Oryza rufipogon ORUFI12G05060 N
Pavir.Fa00930 Panicum virgatum Pavir.Fa00930 N
PRUPE_ppa024046mg Prunus persica PRUPE_ppa024046mg N
PVAR5_0486 Byssochlamys spectabilis PVAR5_0486 N
Sb02g013020 Sorghum bicolor Sb02g013020 N
TRIUR3_02266 Triticum urartu TRIUR3_02266 N
ZBAI_00205 Zygosaccharomyces bailii ZBAI_00205 N