Bo7g098260 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo7g098260 T343755_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.971 0.544
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.971 0.538
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.943 0.380
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.921 0.405
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.921 0.405
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.907 0.342
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.907 0.342
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.891 0.316
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.883 0.310
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.867 0.291
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.865 0.285
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.865 0.285
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.858 0.285
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.857 0.291
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.857 0.291
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.857 0.291
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g098260.1 TCP 64 363

Links

Other TCP family TFs
Other Brassica oleracea TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29727.m000472 Ricinus communis 29727.m000472 I
ASIL1 Arabidopsis thaliana AT1G54060 D
Bo3g184450 Brassica oleracea Bo3g184450 I
Bo6g050870 Brassica oleracea Bo6g050870 I
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I
Bra014370 Brassica rapa Bra014370 I
Bra037960 Brassica rapa Bra037960 I
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I
Carubv10009310m.g Capsella rubella Carubv10009310m.g I
Carubv10015798m.g Capsella rubella Carubv10015798m.g I
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I
cassava47424.m1 Manihot esculenta cassava47424.m1 I
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I
GLYMA16G01370 Glycine max GLYMA16G01370 I
MTR_8g022290 Medicago truncatula MTR_8g022290 I
TCM_029209 Theobroma cacao TCM_029209 I
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I