SapurV1A.0333s0240 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.0333s0240 T345049_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP7
M07294_2.00 		Arabidopsis thaliana
RTGGGNCCCAC
GTGGGNCCCAY		 Dap-seq
OMalley et al.(2016)
TCP7_col_a 		0.970 0.862
TCP21
M07292_2.00 		Arabidopsis thaliana
NNRTGGGDCCCACN
NGTGGGHCCCAYNN		 Dap-seq
OMalley et al.(2016)
At5g08330_col_a 		0.969 0.816
TCP21
M07293_2.00 		Arabidopsis thaliana
RTRGGDCCCACH
DGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a 		0.969 0.816
TCP23
M00891_2.00 		Arabidopsis thaliana
NNGGKCCCAC
GTGGGMCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP23 		0.960 0.736
TCP19
M02504_2.00 		Arabidopsis thaliana
NNGGVCCCAC
GTGGGBCCNN		 PBM
Weirauch et al.(2014)
pTH7452 		0.959 0.632
PCF2
M11399_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF2_01 		0.959 0.644
TCP22
M07279_2.00 		Arabidopsis thaliana
RTRGGNCCCACHN
NDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a 		0.958 0.724
TCP22
M07280_2.00 		Arabidopsis thaliana
RTGGGDCCCACNN
NNGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At1g72010_col 		0.958 0.724
TCP14
M07289_2.00 		Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC
GTGGGHCCCACVHBMTHTBT		 Dap-seq
OMalley et al.(2016)
TCP14_col_b 		0.951 0.724
PK12736.1
M01315_2.00 		Cannabis sativa
NRRSCMYAYNNNNN
NNNNNRTRKGSYYN		 PBM
Lambert et al.(2019)
pTH10121 		0.950 0.690
OsI_08196
M02513_2.00 		Oryza sativa
GGGCCCAC
GTGGGCCC		 PBM
Weirauch et al.(2014)
pTH9274 		0.950 0.678
OS02G0635800
M02512_2.00 		Oryza sativa
NBGGGCCCVN
NBGGGCCCVN		 PBM
Weirauch et al.(2014)
pTH8856 		0.949 0.690
TCP8
M01311_2.00 		Arabidopsis thaliana
NGGNMCCAC
GTGGKNCCN		 PBM
Lambert et al.(2019)
pTH11569 		0.949 0.724
TCP20
M02502_2.00 		Arabidopsis thaliana
GGSCCCACNN
NNGTGGGSCC		 PBM
Weirauch et al.(2014)
pTH8159 		0.949 0.632
TCP20
M07285_2.00 		Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC
GTGGGYCCCACNNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
TCP20_col_a 		0.949 0.632
TCP20
M07286_2.00 		Arabidopsis thaliana
RTGGGDCCCACH
DGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
TCP20_colamp_a 		0.949 0.632
TCP20
M11397_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP20_01 		0.949 0.632
AT-TCP20
M02507_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9229 		0.949 0.621
LjSGA_053525.1
M02518_2.00 		Lotus japonicus
GGNCCCAC
GTGGGNCC		 PBM
Weirauch et al.(2014)
pTH9201 		0.948 0.621
TCP15
M00892_2.00 		Arabidopsis thaliana
NNGGNCCCAC
GTGGGNCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP15 		0.946 0.667
TCP15
M07277_2.00 		Arabidopsis thaliana
RTRGGDCCCACHH
DDGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_col_a 		0.946 0.667
TCP15
M07278_2.00 		Arabidopsis thaliana
RTRGGNCCCACHW
WDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a 		0.946 0.667
TCP15
M11394_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP15_01 		0.946 0.667
cassava45561.m1
M02516_2.00 		Manihot esculenta
KGGVCCCACH
DGTGGGBCCM		 PBM
Weirauch et al.(2014)
pTH9207 		0.944 0.678
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9232 		0.941 0.609
PK14653.1
M01317_2.00 		Cannabis sativa
BGGSCCCAC
GTGGGSCCV		 PBM
Lambert et al.(2019)
pTH11324 		0.936 0.598
PK14653.1
M02517_2.00 		Cannabis sativa
BTGGGCCCAV
BTGGGCCCAV		 PBM
Weirauch et al.(2014)
pTH9586 		0.936 0.598
GLYMA19G26560
M02511_2.00 		Glycine max
BGGBCCCAC
GTGGGVCCV		 PBM
Weirauch et al.(2014)
pTH9184 		0.936 0.667
PK13314.1
M01316_2.00 		Cannabis sativa
NNGGNCCCAC
GTGGGNCCNN		 PBM
Lambert et al.(2019)
pTH11330 		0.934 0.644
VIT_15s0048g01150
M02515_2.00 		Vitis vinifera
NNGGNCCCAC
GTGGGNCCNN		 PBM
Weirauch et al.(2014)
pTH9294 		0.934 0.609
TCP9
M01086_2.00 		Arabidopsis thaliana
NNGGGCCCACN
NGTGGGCCCNN		 PBM
Sullivan et al.(2014)
pTH9796 		0.933 0.632
TCP9
M07281_2.00 		Arabidopsis thaliana
RTGGGDCCCAC
GTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a 		0.933 0.632
TCP9
M07282_2.00 		Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN
NVNHNHNHHGTGGGYCCCACH		 Dap-seq
OMalley et al.(2016)
At2g45680_col_b 		0.933 0.632
TCP11
M11395_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_01 		0.852 0.517
TCP11
M11396_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_02 		0.852 0.517
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0333s0240.1.p TCP 39 166

Links

Other TCP family TFs
Other Salix purpurea TFs

660 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004747 Calypte anna Aan_R004747 I
Afo_R014150 Aptenodytes forsteri Afo_R014150 I
Alligator_sinensis_CCG017359.1 Alligator sinensis Alligator_sinensis_CCG017359.1 I
Brh_R002803 Buceros rhinoceros Brh_R002803 I
Cmyd_10021519 Chelonia mydas Cmyd_10021519 I
HDX Anolis carolinensis ENSACAG00000014116 I
ENSAPLG00000007946 Anas platyrhynchos ENSAPLG00000007946 I
HDX Canis familiaris ENSCAFG00000017380 I
HDX Callithrix jacchus ENSCJAG00000008295 I
HDX Cavia porcellus ENSCPOG00000014501 I
ENSCSAG00000010546 Chlorocebus sabaeus ENSCSAG00000010546 I
hdx Danio rerio ENSDARG00000079382 I
HDX Equus caballus ENSECAG00000024862 I
HDX Erinaceus europaeus ENSEEUG00000011626 I
HDX Echinops telfairi ENSETEG00000018031 I
ENSFALG00000004050 Ficedula albicollis ENSFALG00000004050 I
HDX Felis catus ENSFCAG00000005781 I
HDX Homo sapiens ENSG00000165259 D
hdx Gasterosteus aculeatus ENSGACG00000018543 I
HDX Gallus gallus ENSGALG00000007041 I
HDX Gorilla gorilla ENSGGOG00000005551 I
ENSGMOG00000004501 Gadus morhua ENSGMOG00000004501 I
ENSLACG00000001553 Latimeria chalumnae ENSLACG00000001553 I
HDX Loxodonta africana ENSLAFG00000028655 I
ENSLOCG00000015046 Lepisosteus oculatus ENSLOCG00000015046 I
HDX Meleagris gallopavo ENSMGAG00000004732 I
HDX Macaca mulatta ENSMMUG00000020536 I
HDX Monodelphis domestica ENSMODG00000014307 I
ENSMPUG00000006315 Mustela putorius furo ENSMPUG00000006315 I
Hdx Mus musculus ENSMUSG00000034551 D
ENSNLEG00000002624 Nomascus leucogenys ENSNLEG00000002624 I
ENSOARG00000001832 Ovis aries ENSOARG00000001832 I
HDX Oryctolagus cuniculus ENSOCUG00000000903 I
HDX Otolemur garnettii ENSOGAG00000031446 I
ENSONIG00000017662 Oreochromis niloticus ENSONIG00000017662 I
hdx Oryzias latipes ENSORLG00000008466 I
ENSP00000297977 Macaca fascicularis ENSP00000297977 I
ENSPANG00000014327 Papio anubis ENSPANG00000014327 I
ENSPFOG00000004291 Poecilia formosa ENSPFOG00000004291 I
ENSPPYG00000020514 Pongo abelii ENSPPYG00000020514 I
ENSPSIG00000003320 Pelodiscus sinensis ENSPSIG00000003320 I
HDX Pan troglodytes ENSPTRG00000022065 I
Hdx Rattus norvegicus ENSRNOG00000037799 I
HDX Sorex araneus ENSSARG00000009351 I
ENSSHAG00000014376 Sarcophilus harrisii ENSSHAG00000014376 I
HDX Taeniopygia guttata ENSTGUG00000002499 I
rps6kal Tetraodon nigroviridis ENSTNIG00000015774 I
hdx Takifugu rubripes ENSTRUG00000008150 I
ENSTSYG00000009619 Tarsius syrichta ENSTSYG00000009619 I
HDX Tursiops truncatus ENSTTRG00000000100 I
HDX Vicugna pacos ENSVPAG00000003255 I
ENSXMAG00000011901 Xiphophorus maculatus ENSXMAG00000011901 I
Gfo_R008526 Geospiza fortis Gfo_R008526 I
Ogr06876 Ophisaurus gracilis Ogr06876 I
Pvit_02951 Pogona vitticeps Pvit_02951 I
hdx Xenopus tropicalis XB-GENE-853748 I