CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000011901
(
Xiphophorus maculatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSXMAG00000011901
T217224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.678
0.745
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.678
0.745
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000011920
Homeodomain
2
59
NLRSVFTAEQQRILERYYENGMTNQSKACFQLILQCAQEAKLDFSVVRTWVGNKRRKL
ENSXMAP00000011920
Homeodomain
453
512
QDRTQFSDGDLVQLKRYWDRGMTSLGSVCREKIAAAANQLNVDTEIVKTWISNRRRKYRL
Links
Other
Homeodomain
family TFs
Other
Xiphophorus maculatus
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000004291
Poecilia formosa
ENSPFOG00000004291
I
0.867
hdx
Oryzias latipes
ENSORLG00000008466
I
0.860
hdx
Gasterosteus aculeatus
ENSGACG00000018543
I
0.850
ENSONIG00000017662
Oreochromis niloticus
ENSONIG00000017662
I
0.850
rps6kal
Tetraodon nigroviridis
ENSTNIG00000015774
I
0.832
ENSGMOG00000004501
Gadus morhua
ENSGMOG00000004501
I
0.826
hdx
Takifugu rubripes
ENSTRUG00000008150
I
0.824
ENSLOCG00000015046
Lepisosteus oculatus
ENSLOCG00000015046
I
0.729
hdx
Danio rerio
ENSDARG00000079382
I
0.718
Hdx
Rattus norvegicus
ENSRNOG00000037799
I
0.704
ENSLACG00000001553
Latimeria chalumnae
ENSLACG00000001553
I
0.703
HDX
Canis familiaris
ENSCAFG00000017380
I
0.694
HDX
Anolis carolinensis
ENSACAG00000014116
I
0.680
Ogr06876
Ophisaurus gracilis
Ogr06876
I
0.680
Pvit_02951
Pogona vitticeps
Pvit_02951
I
0.680
ENSAPLG00000007946
Anas platyrhynchos
ENSAPLG00000007946
I
0.678
HDX
Callithrix jacchus
ENSCJAG00000008295
I
0.678
HDX
Cavia porcellus
ENSCPOG00000014501
I
0.678
ENSCSAG00000010546
Chlorocebus sabaeus
ENSCSAG00000010546
I
0.678
HDX
Equus caballus
ENSECAG00000024862
I
0.678
HDX
Erinaceus europaeus
ENSEEUG00000011626
I
0.678
HDX
Echinops telfairi
ENSETEG00000018031
I
0.678
ENSFALG00000004050
Ficedula albicollis
ENSFALG00000004050
I
0.678
HDX
Felis catus
ENSFCAG00000005781
I
0.678
HDX
Homo sapiens
ENSG00000165259
D
0.678
HDX
Gallus gallus
ENSGALG00000007041
I
0.678
HDX
Gorilla gorilla
ENSGGOG00000005551
I
0.678
HDX
Loxodonta africana
ENSLAFG00000028655
I
0.678
HDX
Meleagris gallopavo
ENSMGAG00000004732
I
0.678
HDX
Macaca mulatta
ENSMMUG00000020536
I
0.678
HDX
Monodelphis domestica
ENSMODG00000014307
I
0.678
ENSMPUG00000006315
Mustela putorius furo
ENSMPUG00000006315
I
0.678
Hdx
Mus musculus
ENSMUSG00000034551
D
0.678
ENSNLEG00000002624
Nomascus leucogenys
ENSNLEG00000002624
I
0.678
ENSOARG00000001832
Ovis aries
ENSOARG00000001832
I
0.678
HDX
Oryctolagus cuniculus
ENSOCUG00000000903
I
0.678
HDX
Otolemur garnettii
ENSOGAG00000031446
I
0.678
ENSPANG00000014327
Papio anubis
ENSPANG00000014327
I
0.678
ENSPPYG00000020514
Pongo abelii
ENSPPYG00000020514
I
0.678
ENSPSIG00000003320
Pelodiscus sinensis
ENSPSIG00000003320
I
0.678
HDX
Pan troglodytes
ENSPTRG00000022065
I
0.678
HDX
Sorex araneus
ENSSARG00000009351
I
0.678
ENSSHAG00000014376
Sarcophilus harrisii
ENSSHAG00000014376
I
0.678
HDX
Taeniopygia guttata
ENSTGUG00000002499
I
0.678
ENSTSYG00000009619
Tarsius syrichta
ENSTSYG00000009619
I
0.678
HDX
Vicugna pacos
ENSVPAG00000003255
I
0.678
Aan_R004747
Calypte anna
Aan_R004747
I
0.678
Afo_R014150
Aptenodytes forsteri
Afo_R014150
I
0.678
Alligator_sinensis_CCG017359.1
Alligator sinensis
Alligator_sinensis_CCG017359.1
I
0.678
Brh_R002803
Buceros rhinoceros
Brh_R002803
I
0.678
Cmyd_10021519
Chelonia mydas
Cmyd_10021519
I
0.678
ENSP00000297977
Macaca fascicularis
ENSP00000297977
I
0.678
Gfo_R008526
Geospiza fortis
Gfo_R008526
I
0.678
HDX
Tursiops truncatus
ENSTTRG00000000100
I
0.677
hdx
Xenopus tropicalis
XB-GENE-853748
I
0.677