CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000024699
(
Poecilia formosa
)
TCR/CxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03638 (TCR)
IPR005172
ENSPFOG00000024699
T345320_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN
NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672
0.770
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW
WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672
0.738
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN
NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672
0.738
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH
DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672
0.721
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY
RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672
0.721
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672
0.721
lin54
M02526_2.00
Danio rerio
NHTYRAAH
DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672
0.705
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672
0.705
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672
0.639
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH
DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672
0.623
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672
0.623
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672
0.623
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672
0.623
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN
NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672
0.590
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN
NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672
0.590
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672
0.574
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672
0.557
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672
0.557
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672
0.541
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH
DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672
0.541
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672
0.541
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672
0.541
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672
0.541
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672
0.541
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672
0.541
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672
0.525
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672
0.508
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH
DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672
0.492
For this family, TFs with SR scores >
0.660
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000022391
TCR/CxC
1
23
YCECFANGVMCSNCDCSNCHNNE
ENSPFOP00000022391
TCR/CxC
61
98
NKGCNCKRSGCLKNYCECYEANIQCTSSCKCIGCLNHT
ENSPFOP00000025222
TCR/CxC
1
23
YCECFANGVMCSNCDCSNCHNNE
ENSPFOP00000025222
TCR/CxC
61
98
NKGCNCKRSGCLKNYCECYEANIQCTSSCKCIGCLNHT
Links
Other
TCR/CxC
family TFs
Other
Poecilia formosa
TFs
1214 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HR96
Aedes aegypti
AAEL007202
I
AALB008395
Anopheles albimanus
AALB008395
I
AARA011580
Anopheles arabiensis
AARA011580
I
AATE006049
Anopheles atroparvus
AATE006049
I
ACAC_0000565201
Angiostrongylus cantonensis
ACAC_0000565201
I
ACAC_0001358501
Angiostrongylus cantonensis
ACAC_0001358501
I
ACEP16468
Atta cephalotes
ACEP16468
I
ACOC_0000064201
Angiostrongylus costaricensis
ACOC_0000064201
I
ACOM033140
Anopheles coluzzii
ACOM033140
I
ACUA008166
Anopheles culicifacies
ACUA008166
I
ADAC003041
Anopheles darlingi
ADAC003041
I
ADIR005534
Anopheles dirus
ADIR005534
I
AEPI000232
Anopheles epiroticus
AEPI000232
I
AFAF019254
Anopheles farauti
AFAF019254
I
Afo_R013462
Aptenodytes forsteri
Afo_R013462
I
AFUN010189
Anopheles funestus
AFUN010189
I
AGAP004224
Anopheles gambiae
AGAP004224
I
AMAM022585
Anopheles maculatus
AMAM022585
I
AMEC016766
Anopheles melas
AMEC016766
I
AMEM008752
Anopheles merus
AMEM008752
I
AMIN004130
Anopheles minimus
AMIN004130
I
ANCCAN_15412
Ancylostoma caninum
ANCCAN_15412
I
ANCCAN_22289
Ancylostoma caninum
ANCCAN_22289
I
ANCCEY_01199
Ancylostoma ceylanicum
ANCCEY_01199
I
ANCDUO_17434
Ancylostoma duodenale
ANCDUO_17434
I
AQUA008824
Anopheles quadriannulatus
AQUA008824
I
ASIM_0001146101
Anisakis simplex
ASIM_0001146101
I
ASIS011648
Anopheles sinensis
ASIS011648
I
ASTEI03690
Anopheles stephensi
ASTEI03690
I
ASU_07898
Ascaris suum
ASU_07898
I
BGIBMGA010782
Bombyx mori
BGIBMGA010782
I
Bm3787
Brugia malayi
Bm3787
I
BXY_1418300
Bursaphelenchus xylophilus
BXY_1418300
I
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
CBG04512
Caenorhabditis briggsae
CBG04512
I
CBG05944
Caenorhabditis briggsae
CBG05944
I
CBG07759
Caenorhabditis briggsae
CBG07759
I
CBN06351
Caenorhabditis brenneri
CBN06351
I
CBN08904
Caenorhabditis brenneri
CBN08904
I
CBN26095
Caenorhabditis brenneri
CBN26095
I
CBN31767
Caenorhabditis brenneri
CBN31767
I
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
CGOC_0000057501
Cylicostephanus goldi
CGOC_0000057501
I
CGOC_0001446101
Cylicostephanus goldi
CGOC_0001446101
I
CJA03214
Caenorhabditis japonica
CJA03214
I
CJA11532
Caenorhabditis japonica
CJA11532
I
CLEC000589
Cimex lectularius
CLEC000589
I
CPIJ016038
Culex quinquefasciatus
CPIJ016038
I
CpipJ_CPIJ016038
Culex pipiens
CpipJ_CPIJ016038
I
CRE05362
Caenorhabditis remanei
CRE05362
I
CRE07237
Caenorhabditis remanei
CRE07237
I
CRE12534
Caenorhabditis remanei
CRE12534
I
CRE19106
Caenorhabditis remanei
CRE19106
I
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
DICVIV_03942
Dictyocaulus viviparus
DICVIV_03942
I
DME_0000943901
Dracunculus medinensis
DME_0000943901
I
EEL_0000817201
Elaeophora elaphi
EEL_0000817201
I
vdr-a
Ciona intestinalis
ENSCING00000020740
I
ENSPMAG00000003695
Petromyzon marinus
ENSPMAG00000003695
I
EVEC_0001257601
Enterobius vermicularis
EVEC_0001257601
I
Hr96
Drosophila melanogaster
FBgn0015240
D
Hr96
Drosophila grimshawi
FBgn0020174
I
GA11197
Drosophila pseudoobscura
FBgn0071252
I
GF16320
Drosophila ananassae
FBgn0093341
I
GG11347
Drosophila erecta
FBgn0103647
I
GI22223
Drosophila mojavensis
FBgn0144951
I
GM17786
Drosophila sechellia
FBgn0172693
I
GD21158
Drosophila simulans
FBgn0192609
I
GJ24344
Drosophila virilis
FBgn0211424
I
GK14276
Drosophila willistoni
FBgn0216282
I
GE23543
Drosophila yakuba
FBgn0240719
I
GB52904
Apis mellifera
GB52904
I
HCOI00283900
Haemonchus contortus
HCOI00283900
I
HCOI00567800
Haemonchus contortus
HCOI00567800
I
HCOI01526000
Haemonchus contortus
HCOI01526000
I
HHAL000201-PA
Halyomorpha halys
HHAL000201-PA
I
HMEL016865
Heliconius melpomene
HMEL016865
I
HPBE_0001028701
Heligmosomoides bakeri
HPBE_0001028701
I
HPBE_0002060301
Heligmosomoides bakeri
HPBE_0002060301
I
HPLM_0001265101
Haemonchus placei
HPLM_0001265101
I
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
ISCW009328
Ixodes scapularis
ISCW009328
I
KGM_05575
Danaus plexippus
KGM_05575
I
L596_g25556
Steinernema carpocapsae
L596_g25556
I
L596_g8771
Steinernema carpocapsae
L596_g8771
I
L596_g9326
Steinernema carpocapsae
L596_g9326
I
L798_15710
Zootermopsis nevadensis
L798_15710
I
L889_g10853
Steinernema feltiae
L889_g10853
I
L892_g14860
Steinernema scapterisci
L892_g14860
I
L892_g18386
Steinernema scapterisci
L892_g18386
I
L892_g26350
Steinernema scapterisci
L892_g26350
I
L893_g16225
Steinernema glaseri
L893_g16225
I
L893_g3995
Steinernema glaseri
L893_g3995
I
L893_g8292
Steinernema glaseri
L893_g8292
I
L898_g10498
Steinernema monticolum
L898_g10498
I
L898_g1817
Steinernema monticolum
L898_g1817
I
LCUP002913
Lucilia cuprina
LCUP002913
I
LDEC005794
Leptinotarsa decemlineata
LDEC005794
I
LOAG_10538
Loa loa
LOAG_10538
I
MCINX005291
Melitaea cinxia
MCINX005291
I
MDOA002084
Musca domestica
MDOA002084
I
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
Minc13296
Meloidogyne incognita
Minc13296
I
Minc18589
Meloidogyne incognita
Minc18589
I
nAv.1.0.1.g08097
Acanthocheilonema viteae
nAv.1.0.1.g08097
I
nAv.1.0.1.g10286
Acanthocheilonema viteae
nAv.1.0.1.g10286
I
NBR_0000856001
Nippostrongylus brasiliensis
NBR_0000856001
I
nDi.2.2.2.g04518
Dirofilaria immitis
nDi.2.2.2.g04518
I
nDi.2.2.2.g09652
Dirofilaria immitis
nDi.2.2.2.g09652
I
NECAME_01947
Necator americanus
NECAME_01947
I
nLs.2.1.2.g07694
Litomosoides sigmodontis
nLs.2.1.2.g07694
I
NV10187
Nasonia vitripennis
NV10187
I
Ocbimv22029529m.g
Octopus bimaculoides
Ocbimv22029529m.g
I
OFLC_0000598101
Onchocerca flexuosa
OFLC_0000598101
I
PHUM460970
Pediculus humanus
PHUM460970
I
Ppa-nhr-48
Pristionchus pacificus
PPA20177
I
PPAI005921
Phlebotomus papatasi
PPAI005921
I
PTRK_0001132000
Parastrongyloides trichosuri
PTRK_0001132000
I
PTRK_0001378700
Parastrongyloides trichosuri
PTRK_0001378700
I
RPRC001794
Rhodnius prolixus
RPRC001794
I
RSKR_0001015700
Rhabditophanes kr3021
RSKR_0001015700
I
scaffold1545-EXSNAP2012.2
Pristionchus exspectatus
scaffold1545-EXSNAP2012.2
I
scaffold61-EXSNAP2012.64
Pristionchus exspectatus
scaffold61-EXSNAP2012.64
I
SMAR007355
Strigamia maritima
SMAR007355
I
SMUV_0001002101
Syphacia muris
SMUV_0001002101
I
SPAL_0000150000
Strongyloides papillosus
SPAL_0000150000
I
SPAL_0001591300
Strongyloides papillosus
SPAL_0001591300
I
SSTP_0001172300
Strongyloides stercoralis
SSTP_0001172300
I
SSTP_0001272200
Strongyloides stercoralis
SSTP_0001272200
I
SVE_0958300
Strongyloides venezuelensis
SVE_0958300
I
SVE_0996600
Strongyloides venezuelensis
SVE_0996600
I
SVUK_0001112701
Strongylus vulgaris
SVUK_0001112701
I
TC010645
Tribolium castaneum
TC010645
I
TCNE_0000258801
Toxocara canis
TCNE_0000258801
I
TELCIR_04193
Teladorsagia circumcincta
TELCIR_04193
I
TELCIR_04889
Teladorsagia circumcincta
TELCIR_04889
I
TELCIR_05516
Teladorsagia circumcincta
TELCIR_05516
I
tetur17g03630
Tetranychus urticae
tetur17g03630
I
tetur34g00750
Tetranychus urticae
tetur34g00750
I
daf-12
Caenorhabditis elegans
WBGene00000908
D
nhr-8
Caenorhabditis elegans
WBGene00003607
I
nhr-48
Caenorhabditis elegans
WBGene00003638
I
WBGene00239037
Onchocerca volvulus
WBGene00239037
I
WUBG_12640
Wuchereria bancrofti
WUBG_12640
I
WUBG_13334
Wuchereria bancrofti
WUBG_13334
I
YQE_04331
Dendroctonus ponderosae
YQE_04331
I