Bra039334 (Brassica rapa)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 Bra039334 T350764_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRF9
M07370_2.00 		Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN		 Dap-seq
OMalley et al.(2016)
GRF9_col_a 		0.860 0.860
GRF9
M07371_2.00 		Arabidopsis thaliana
TGTCAGAN
NTCTGACA		 Dap-seq
OMalley et al.(2016)
GRF9_colamp_a 		0.860 0.860
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra039334.1-P WRC 86 128
Bra039334.1-P WRC 307 349

Links

Other WRC family TFs
Other Brassica rapa TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRF9 Arabidopsis thaliana AT2G45480 D 0.871
Bo4g195580 Brassica oleracea Bo4g195580 I 0.988
Bostr.25993s0227 Boechera stricta Bostr.25993s0227 I 0.859
Cagra.0698s0014 Capsella grandiflora Cagra.0698s0014 I 0.872
Carubv10023501m.g Capsella rubella Carubv10023501m.g I 0.872
cassava28657.m1 Manihot esculenta cassava28657.m1 I 0.706
Ca_19588 Cicer arietinum Ca_19588 I 0.733
Cla021612 Citrullus lanatus Cla021612 N 0.744
Cucsa.257800 Cucumis sativus Cucsa.257800 N 0.733
AtGRF9 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002259 I 0.847
GLYMA01G34650 Glycine max GLYMA01G34650 N 0.709
Gorai.007G092400 Gossypium raimondii Gorai.007G092400 N 0.718
MTR_8g035910 Medicago truncatula MTR_8g035910 N 0.709
PK07653.1 Cannabis sativa PK07653.1 I 0.744
POPTR_0014s06750 Populus trichocarpa POPTR_0014s06750 I 0.729
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N 0.709
TCM_005483 Theobroma cacao TCM_005483 I 0.721
Thhalv10001460m.g Eutrema salsugineum Thhalv10001460m.g I 0.882
AtGRF9 Vitis vinifera VIT_15s0048g01740 I 0.771