AWRI1499_3090 (Brettanomyces bruxellensis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 AWRI1499_3090 T359793_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAL4
M01599_2.00 		Saccharomyces cerevisiae
NYCGGVN
NBCCGRN		 PBM
Zhu et al.(2009)
Gal4 		0.565 0.658
GAL4
M07559_2.00 		Saccharomyces cerevisiae
GGANVRCW
WGYBNTCC		 ChIP-exo
Rhee et al.(2011)
Gal4_1 		0.565 0.658
GAL4
M07560_2.00 		Saccharomyces cerevisiae
GGRAAARGGTC
GACCYTTTYCC		 ChIP-exo
Rhee et al.(2011)
Gal4_2 		0.565 0.658
GAL4
M07561_2.00 		Saccharomyces cerevisiae
AGAACAA
TTGTTCT		 ChIP-exo
Rhee et al.(2011)
Gal4_3 		0.565 0.658
GAL4
M08698_2.00 		Saccharomyces cerevisiae
CGGVSNNVTNYNSNCCG
CGGNSNRNABNNSBCCG		 Misc
DeBoer et al.(2011)
YPL248C_1510 		0.565 0.658
GAL4
M11487_2.00 		Saccharomyces cerevisiae
BYWCGGWSVAVWGHBVBCCGDDV
BHHCGGVBVDCWBTBSWCCGWRV		 Transfac
Matys et al.(2006)
F$GAL4_01 		0.565 0.658
GAL4
M11488_2.00 		Saccharomyces cerevisiae
HKYWCGGHVVRVWGHBNBCCGD
HCGGVNVDCWBYBBDCCGWRMD		 Transfac
Matys et al.(2006)
F$GAL4_C 		0.565 0.658
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EIF47040 Zinc cluster 182 220

Links

Other Zinc cluster family TFs
Other Brettanomyces bruxellensis TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21336_YPL248C Saccharomyces mikatae 21336_YPL248C I 0.565
21920_YPL248C Saccharomyces paradoxus 21920_YPL248C I 0.565
24374_YPL248C Saccharomyces bayanus 24374_YPL248C I 0.581
CANTEDRAFT_103981 Candida tenuis CANTEDRAFT_103981 I 0.576
CANTEDRAFT_110774 Candida tenuis CANTEDRAFT_110774 N 0.544
CaO19.12798 Candida albicans CaO19.12798 N 0.608
CaO19.5338 Candida albicans CaO19.5338 N 0.608
CD36_24740 Candida dubliniensis CD36_24740 N 0.608
CLUG_00203 Clavispora lusitaniae CLUG_00203 I 0.632
CLUG_00203 Candida lusitaniae CLUG_00203 I 0.632
CORT_0C07270 Candida orthopsilosis CORT_0C07270 N 0.624
CPAG_02485 Candida parapsilosis CPAG_02485 N 0.624
CTRG_01928 Candida tropicalis CTRG_01928 N 0.593
DEHA2C11418g Debaryomyces hansenii DEHA2C11418g N 0.558
DEHA2F03366g Debaryomyces hansenii DEHA2F03366g I 0.631
G210_5810 Candida maltosa G210_5810 N 0.609
GNLVRS01_PISO0E01698g Millerozyma farinosa GNLVRS01_PISO0E01698g N 0.547
GNLVRS01_PISO0F02711g Millerozyma farinosa GNLVRS01_PISO0F02711g I 0.661
GNLVRS01_PISO0I01526g Millerozyma farinosa GNLVRS01_PISO0I01526g N 0.547
GNLVRS01_PISO0J02671g Millerozyma farinosa GNLVRS01_PISO0J02671g I 0.661
gwh1.6.1.1306.1 Pichia stipitis gwh1.6.1.1306.1 N 0.606
JL09_g5364 Pichia kudriavzevii JL09_g5364 N 0.626
KUCA_T00002035001 Kuraishia capsulata KUCA_T00002035001 N 0.558
KUCA_T00003059001 Kuraishia capsulata KUCA_T00003059001 N 0.568
LELG_02329 Lodderomyces elongisporus LELG_02329 N 0.624
NCAS_0G01100 Naumovozyma castellii NCAS_0G01100 I 0.565
PAS_FragB_0075 Komagataella pastoris PAS_FragB_0075 I 0.607
PGUG_04835 Candida guilliermondii PGUG_04835 I 0.581
PGUG_04835 Meyerozyma guilliermondii PGUG_04835 I 0.581
PICST_46395 Scheffersomyces stipitis PICST_46395 N 0.547
PICST_9952 Scheffersomyces stipitis PICST_9952 N 0.606
SAKL0A02860g Lachancea kluyveri SAKL0A02860g I 0.612
Scas_Contig699.7 Saccharomyces castellii Scas_Contig699.7 I 0.565
SKUD_900401 Saccharomyces kudriavzevii SKUD_900401 I 0.541
SPAPADRAFT_137810 Spathaspora passalidarum SPAPADRAFT_137810 N 0.581
SU7_3455 Saccharomyces arboricola SU7_3455 I 0.541
TBLA_0G01800 Tetrapisispora blattae TBLA_0G01800 I 0.581
TPHA_0H01980 Tetrapisispora phaffii TPHA_0H01980 I 0.581
XP_002490850.1 Pichia pastoris XP_002490850.1 I 0.607
GAL4 Saccharomyces cerevisiae YPL248C D 0.565
ZBAI_04658 Zygosaccharomyces bailii ZBAI_04658 I 0.581
ZBAI_06699 Zygosaccharomyces bailii ZBAI_06699 I 0.581
ZYRO0E08272g Zygosaccharomyces rouxii ZYRO0E08272g N 0.561