CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCCADRAFT_5667
(
Bipolaris zeicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
COCCADRAFT_5667
T364873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
qa-1F
M11489_2.00
Neurospora crassa
HHGGNTAADBVYTYAWCCBB
VVGGWTRARBVHTTANCCDD
Transfac
Matys et al.(2006)
F$QA1F_01
0.587
0.667
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUC32676
Zinc cluster
27
66
RACDQCRVAREKCDGLQPTCSTCSGTTRKCSYTANPKKRG
Links
Other
Zinc cluster
family TFs
Other
Bipolaris zeicola
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004910
Ailuropoda melanoleuca
ENSAMEG00000004910
I
ZNF550
Canis familiaris
ENSCAFG00000002421
I
ZNF550
Callithrix jacchus
ENSCJAG00000000044
I
ENSCSAG00000001629
Chlorocebus sabaeus
ENSCSAG00000001629
I
ZNF550
Homo sapiens
ENSG00000251369
D
ZNF550
Gorilla gorilla
ENSGGOG00000014068
I
ZNF550
Macaca mulatta
ENSMMUG00000006122
I
ENSMMUP00000031401
Macaca fascicularis
ENSMMUP00000031401
I
ENSMPUG00000006298
Mustela putorius furo
ENSMPUG00000006298
I
ENSNLEG00000010977
Nomascus leucogenys
ENSNLEG00000010977
I
ENSOARG00000003673
Ovis aries
ENSOARG00000003673
I
ZNF550
Pan troglodytes
ENSPTRG00000011560
I
ZNF550
Tursiops truncatus
ENSTTRG00000000293
I