GSMUA_Achr4G19660_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr4G19660_001 T002380_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.719 0.824
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.719 0.824
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.683 0.765
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.683 0.765
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.683 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P19660_001 AP2 138 190

Links

Other AP2 family TFs
Other Musa acuminata TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARNTL Homo sapiens ENSG00000133794 D 0.000
Arntl Rattus norvegicus ENSRNOG00000014448 D 0.000
Arntl Mus musculus ENSMUSG00000055116 D 0.000
ENSSTOG00000022144 Ictidomys tridecemlineatus ENSSTOG00000022144 I 0.000
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I 0.000
ARNTL Vicugna pacos ENSVPAG00000005926 I 0.000
ARNTL Tursiops truncatus ENSTTRG00000013925 I 0.000
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I 0.000
arntl1a Takifugu rubripes ENSTRUG00000008391 I 0.000
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I 0.000
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I 0.000
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I 0.000
ARNTL Tupaia belangeri ENSTBEG00000017387 I 0.000
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I 0.000
ARNTL Sus scrofa ENSSSCG00000013397 I 0.000
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I 0.000
ARNTL Pteropus vampyrus ENSPVAG00000006712 I 0.000
ARNTL Pan troglodytes ENSPTRG00000003376 I 0.000
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I 0.000
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I 0.000
ENSPMAG00000004171 Petromyzon marinus ENSPMAG00000004171 I 0.000
Gfo_R013617 Geospiza fortis Gfo_R013617 I 0.000
arntl.S Xenopus laevis XB-GENE-495459 I 0.000
arntl Xenopus tropicalis XB-GENE-495455 I 0.000
arntl.L Xenopus laevis XB-GENE-17342306 I 0.000
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I 0.000
fgenesh2_pg.scaffold_279000045 Branchiostoma floridae fgenesh2_pg.scaffold_279000045 I 0.000
Tal_R003521 Tyto alba Tal_R003521 I 0.000
Pvit_10294 Pogona vitticeps Pvit_10294 I 0.000
Ogr18318 Ophisaurus gracilis Ogr18318 I 0.000
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I 0.000
arntl1a Oryzias latipes ENSORLG00000019370 I 0.000
ENSP00000384517 Macaca fascicularis ENSP00000384517 I 0.000
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I 0.000
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I 0.000
Brh_R010633 Buceros rhinoceros Brh_R010633 I 0.000
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I 0.000
Afo_R014608 Aptenodytes forsteri Afo_R014608 I 0.000
Aan_R006598 Calypte anna Aan_R006598 I 0.000
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I 0.000
ARNTL Cavia porcellus ENSCPOG00000008795 I 0.000
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I 0.000
ARNTL Felis catus ENSFCAG00000010983 I 0.000
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I 0.000
ARNTL Equus caballus ENSECAG00000012118 I 0.000
Arntl Dipodomys ordii ENSDORG00000015539 I 0.000
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I 0.000
arntl1b Danio rerio ENSDARG00000035732 I 0.000
arntl1a Danio rerio ENSDARG00000006791 I 0.000
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I 0.000
ARNTL Gallus gallus ENSGALG00000005378 I 0.000
ARNTL Callithrix jacchus ENSCJAG00000010162 I 0.000
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I 0.000
ARNTL Canis familiaris ENSCAFG00000008095 I 0.000
ARNTL Bos taurus ENSBTAG00000013029 I 0.000
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I 0.000
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I 0.000
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I 0.000
ARNTL Anolis carolinensis ENSACAG00000004497 I 0.000
ARNTL Monodelphis domestica ENSMODG00000008708 I 0.000
CGI_10025278 Crassostrea gigas CGI_10025278 I 0.000
ARNTL Ochotona princeps ENSOPRG00000004853 I 0.000
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I 0.000
ARNTL Otolemur garnettii ENSOGAG00000000736 I 0.000
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I 0.000
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I 0.000
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I 0.000
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I 0.000
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I 0.000
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I 0.000
ARNTL Macaca mulatta ENSMMUG00000009690 I 0.000
ARNTL Myotis lucifugus ENSMLUG00000008503 I 0.000
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I 0.000
ARNTL Meleagris gallopavo ENSMGAG00000005349 I 0.000
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I 0.000
ARNTL Loxodonta africana ENSLAFG00000026673 I 0.000
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I 0.000
ARNTL Gorilla gorilla ENSGGOG00000013211 I 0.000
tetur08g07430 Tetranychus urticae tetur08g07430 N 0.000