OPUNC03G09070 (Oryza punctata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OPUNC03G09070 T003724_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.865 0.856
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.865 0.856
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.862 0.846
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.862 0.846
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.859 0.846
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.859 0.846
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.817 0.846
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.817 0.846
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC03G09070.1 AP2 292 349
OPUNC03G09070.1 AP2 391 443

Links

Other AP2 family TFs
Other Oryza punctata TFs

526 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I
Ca_07304 Cicer arietinum Ca_07304 I
GLYMA19G32850 Glycine max GLYMA19G32850 I
GLYMA03G29940 Glycine max GLYMA03G29940 I
Bra009228 Brassica rapa Bra009228 I
Bo9g175820 Brassica oleracea Bo9g175820 I
mgf007985m Mimulus guttatus mgf007985m N
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N
Carubv10003217m.g Capsella rubella Carubv10003217m.g N
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N
mgf007532m Mimulus guttatus mgf007532m N
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N
Lus10021035.g Linum usitatissimum Lus10021035.g N
Lus10023816.g Linum usitatissimum Lus10023816.g N
MDP0000184307 Malus domestica MDP0000184307 N
MDP0000253656 Malus domestica MDP0000253656 N
MDP0000280005 Malus domestica MDP0000280005 N
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N
PK00827.1 Cannabis sativa PK00827.1 N
POPTR_0453s00230 Populus trichocarpa POPTR_0453s00230 N
Bo2g007410 Brassica oleracea Bo2g007410 N
Bo3g004040 Brassica oleracea Bo3g004040 N
Bra005912 Brassica rapa Bra005912 N
Bra028717 Brassica rapa Bra028717 N
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N
GLYMA02G30800 Glycine max GLYMA02G30800 N
GLYMA09G17404 Glycine max GLYMA09G17404 N
MTR_1g053835 Medicago truncatula MTR_1g053835 N
MTR_7g093030 Medicago truncatula MTR_7g093030 N
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N
Cucsa.353890 Cucumis sativus Cucsa.353890 N
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N
TCM_024886 Theobroma cacao TCM_024886 N
Ca_14198 Cicer arietinum Ca_14198 N
Cla011853 Citrullus lanatus Cla011853 N
Pm025973 Prunus mume Pm025973 N
28582.m000316 Ricinus communis 28582.m000316 N
28582.m000318 Ricinus communis 28582.m000318 N
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N
AT5G06800 Arabidopsis thaliana AT5G06800 N
cassava39743.m1 Manihot esculenta cassava39743.m1 N