Ciclev10033388m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10033388m.g T286689_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10033388m Myb 177 228

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.909
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.831
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.831
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.831
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.831
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.797
Bo2g007410 Brassica oleracea Bo2g007410 N 0.782
Bo9g175820 Brassica oleracea Bo9g175820 I 0.782
Bra009228 Brassica rapa Bra009228 I 0.782
Bra028717 Brassica rapa Bra028717 N 0.782
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.782
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.782
TCM_024886 Theobroma cacao TCM_024886 N 0.782
Cla011853 Citrullus lanatus Cla011853 N 0.782
28582.m000316 Ricinus communis 28582.m000316 N 0.782
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.782
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.782
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.782
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.782
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.782
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.782
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.782
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.782
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.782
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.782
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.782
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.782
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.782
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.782
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.781
Bo3g004040 Brassica oleracea Bo3g004040 N 0.776
Bra005912 Brassica rapa Bra005912 N 0.776
mgf007532m Mimulus guttatus mgf007532m N 0.776
mgf007985m Mimulus guttatus mgf007985m N 0.776
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.774
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.774
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.774
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.767
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.767
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.764
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.761
30226.m001993 Ricinus communis 30226.m001993 N 0.760
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.751
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.749
cassava16780.m1 Manihot esculenta cassava16780.m1 I 0.742
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.736
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.736
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.734
Ca_14198 Cicer arietinum Ca_14198 N 0.734
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.734
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.730
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.730
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.730
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.730
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.730
OB04G35670 Oryza brachyantha OB04G35670 I 0.730
OBART04G28680 Oryza barthii OBART04G28680 I 0.730
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.730
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.730
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.730
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.730
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.730
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.730
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.730
OS04G0665600 Oryza sativa OS04G0665600 I 0.730
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.730
Si022099m.g Setaria italica Si022099m.g I 0.730
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.730
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.729
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.726
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.725
Pm025973 Prunus mume Pm025973 N 0.725
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.725
MDP0000184307 Malus domestica MDP0000184307 N 0.725
MDP0000253656 Malus domestica MDP0000253656 N 0.725
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.721
Aquca_004_00369 Aquilegia coerulea Aquca_004_00369 I 0.721
PK00827.1 Cannabis sativa PK00827.1 N 0.721
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.719
MDP0000280005 Malus domestica MDP0000280005 N 0.718
Eucgr.A00517 Eucalyptus grandis Eucgr.A00517 I 0.698
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.696
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.690
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.690
Ca_07304 Cicer arietinum Ca_07304 I 0.689
GRMZM2G035370 Zea mays GRMZM2G035370 I 0.688
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N 0.684
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N 0.684
VIT_08s0105g00370 Vitis vinifera VIT_08s0105g00370 I 0.684
28582.m000318 Ricinus communis 28582.m000318 N 0.684
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N 0.682
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.677
AMTR_s00131p00063460 Amborella trichopoda AMTR_s00131p00063460 I 0.676
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.674
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.674
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.674
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.674
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.674
OB02G12880 Oryza brachyantha OB02G12880 I 0.672
TCM_021688 Theobroma cacao TCM_021688 I 0.669
29701.m000580 Ricinus communis 29701.m000580 I 0.669
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I 0.669
Lus10004809.g Linum usitatissimum Lus10004809.g I 0.669
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.669
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.669
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I 0.669
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.668
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.668
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N 0.668
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.666
28582.m000317 Ricinus communis 28582.m000317 N 0.665
Gorai.006G182800 Gossypium raimondii Gorai.006G182800 I 0.662
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.661
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I 0.661
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I 0.661
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.661