chr1.LjT38A19.30.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr1.LjT38A19.30.nc T290670_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.LjT38A19.30.nc Myb 83 134

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.848
Ca_07304 Cicer arietinum Ca_07304 I 0.828
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.808
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.808
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.795
Bo2g007410 Brassica oleracea Bo2g007410 N 0.795
Bra028717 Brassica rapa Bra028717 N 0.795
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.795
Cla011853 Citrullus lanatus Cla011853 N 0.795
28582.m000316 Ricinus communis 28582.m000316 N 0.795
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.795
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.795
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.795
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.795
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.795
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.795
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.795
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.795
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.795
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.795
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.794
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.787
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.787
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.787
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.780
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.780
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.777
TCM_024886 Theobroma cacao TCM_024886 N 0.777
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.777
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.777
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.774
Pm025973 Prunus mume Pm025973 N 0.774
mgf017208m Mimulus guttatus mgf017208m N 0.774
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.774
MDP0000184307 Malus domestica MDP0000184307 N 0.774
MDP0000253656 Malus domestica MDP0000253656 N 0.774
Bo3g004040 Brassica oleracea Bo3g004040 N 0.771
Bra005912 Brassica rapa Bra005912 N 0.771
MDP0000280005 Malus domestica MDP0000280005 N 0.768
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.756
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.748
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.748
Ca_14198 Cicer arietinum Ca_14198 N 0.748
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.746
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.746
Bo9g175820 Brassica oleracea Bo9g175820 I 0.735
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.735
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.735
PK00827.1 Cannabis sativa PK00827.1 N 0.734
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.728
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.728
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.726
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.725
Bra009228 Brassica rapa Bra009228 I 0.717
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.708
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.708
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.708
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.708
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.708
OB04G35670 Oryza brachyantha OB04G35670 I 0.708
OBART04G28680 Oryza barthii OBART04G28680 I 0.708
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.708
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.708
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.708
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.708
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.708
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.708
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.708
OS04G0665600 Oryza sativa OS04G0665600 I 0.708
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.708
Si022099m.g Setaria italica Si022099m.g I 0.708
28582.m000318 Ricinus communis 28582.m000318 N 0.708
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.708
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.705
MDP0000142146 Malus domestica MDP0000142146 I 0.699
MDP0000182154 Malus domestica MDP0000182154 I 0.699
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.697
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.690
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.688
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.686
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.686
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.686
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.686
Ciclev10004984m.g Citrus clementina Ciclev10004984m.g I 0.679
orange1.1g014308m.g Citrus sinensis orange1.1g014308m.g I 0.679
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.678
Eucgr.A00517 Eucalyptus grandis Eucgr.A00517 I 0.676
mgf007532m Mimulus guttatus mgf007532m N 0.674
mgf007985m Mimulus guttatus mgf007985m N 0.674
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.674
Traes_6BL_5D8EE6802 Triticum aestivum Traes_6BL_5D8EE6802 I 0.669
TRIUR3_02291 Triticum urartu TRIUR3_02291 I 0.669
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.668
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.668
GRMZM2G035370 Zea mays GRMZM2G035370 I 0.666
estExt_fgenesh1_pg.C_4900005 Physcomitrella patens estExt_fgenesh1_pg.C_4900005 I 0.661