AMTR_s00022p00190540 (Amborella trichopoda)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AMTR_s00022p00190540 T266162_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.682 0.745
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.682 0.745
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.682 0.745
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.682 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN11610 Myb 232 283

Links

Other Myb/SANT family TFs
Other Amborella trichopoda TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000184307 Malus domestica MDP0000184307 N 0.799
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.799
MDP0000253656 Malus domestica MDP0000253656 N 0.799
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.760
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.760
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.760
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.760
Bra028717 Brassica rapa Bra028717 N 0.760
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.760
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.760
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.760
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.760
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.760
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.760
28582.m000316 Ricinus communis 28582.m000316 N 0.760
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.760
Bo2g007410 Brassica oleracea Bo2g007410 N 0.760
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.760
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.760
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.760
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.760
Ca_14198 Cicer arietinum Ca_14198 N 0.760
Pm025973 Prunus mume Pm025973 N 0.760
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.760
Cla011853 Citrullus lanatus Cla011853 N 0.760
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.759
MDP0000280005 Malus domestica MDP0000280005 N 0.754
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.752
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N 0.746
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.745
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.745
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.745
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.742
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.742
TCM_024886 Theobroma cacao TCM_024886 N 0.742
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.742
PK00827.1 Cannabis sativa PK00827.1 N 0.738
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.736
Bo3g004040 Brassica oleracea Bo3g004040 N 0.736
Bra005912 Brassica rapa Bra005912 N 0.736
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.730
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.726
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.726
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.726
Lus10039124.g Linum usitatissimum Lus10039124.g I 0.724
Lus10038734.g Linum usitatissimum Lus10038734.g I 0.724
Bra014348 Brassica rapa Bra014348 I 0.724
estExt_fgenesh1_pg.C_4900005 Physcomitrella patens estExt_fgenesh1_pg.C_4900005 I 0.721
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.720
Traes_7DL_999E12D5D Triticum aestivum Traes_7DL_999E12D5D I 0.718
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.718
Traes_7BL_F20FD5D20 Triticum aestivum Traes_7BL_F20FD5D20 I 0.718
F775_07476 Aegilops tauschii F775_07476 I 0.718
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.715
GRMZM2G035370 Zea mays GRMZM2G035370 I 0.714
MDP0000182154 Malus domestica MDP0000182154 I 0.712
MDP0000142146 Malus domestica MDP0000142146 I 0.712
Ca_07304 Cicer arietinum Ca_07304 I 0.707
estExt_fgenesh1_pg.C_3060021 Physcomitrella patens estExt_fgenesh1_pg.C_3060021 I 0.706
estExt_fgenesh2_pg.C_1120045 Physcomitrella patens estExt_fgenesh2_pg.C_1120045 I 0.705
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.705
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.702
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.701
30226.m001993 Ricinus communis 30226.m001993 N 0.701
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.701
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.700
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.700
Bo9g175820 Brassica oleracea Bo9g175820 I 0.700
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.700
SELMODRAFT_405399 Selaginella moellendorffii SELMODRAFT_405399 I 0.697
SELMODRAFT_447260 Selaginella moellendorffii SELMODRAFT_447260 I 0.697
estExt_fgenesh1_pg.C_600033 Physcomitrella patens estExt_fgenesh1_pg.C_600033 I 0.696
fgenesh1_pg.scaffold_391000034 Physcomitrella patens fgenesh1_pg.scaffold_391000034 I 0.695
fgenesh1_pg.scaffold_143000021 Physcomitrella patens fgenesh1_pg.scaffold_143000021 I 0.695
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.693
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.693
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I 0.692
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I 0.692
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.692
Lus10004809.g Linum usitatissimum Lus10004809.g I 0.692
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I 0.692
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I 0.692
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.692
TCM_021688 Theobroma cacao TCM_021688 I 0.692
orange1.1g014308m.g Citrus sinensis orange1.1g014308m.g I 0.691
Ciclev10004984m.g Citrus clementina Ciclev10004984m.g I 0.691
MLOC_5585 Hordeum vulgare MLOC_5585 I 0.685
Gorai.006G182800 Gossypium raimondii Gorai.006G182800 I 0.685
Traes_4AS_7220D33B3 Triticum aestivum Traes_4AS_7220D33B3 I 0.685
F775_09615 Aegilops tauschii F775_09615 I 0.685
Traes_4DL_2C27C34AF Triticum aestivum Traes_4DL_2C27C34AF I 0.685
Carubv10013698m.g Capsella rubella Carubv10013698m.g I 0.685
Bostr.3640s0078 Boechera stricta Bostr.3640s0078 I 0.685
Cagra.5641s0065 Capsella grandiflora Cagra.5641s0065 I 0.685
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I 0.683
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I 0.683
Traes_5DL_EB47672ED Triticum aestivum Traes_5DL_EB47672ED I 0.682
29805.m001544 Ricinus communis 29805.m001544 I 0.682
Ca_07939 Cicer arietinum Ca_07939 I 0.682
Cla014593 Citrullus lanatus Cla014593 I 0.682
Pm009657 Prunus mume Pm009657 I 0.682
VIT_00s0475g00040 Vitis vinifera VIT_00s0475g00040 I 0.682
TRIUR3_29870 Triticum urartu TRIUR3_29870 I 0.682
Ciclev10015893m.g Citrus clementina Ciclev10015893m.g I 0.682
MDP0000323119 Malus domestica MDP0000323119 I 0.682
orange1.1g020124m.g Citrus sinensis orange1.1g020124m.g I 0.682
MDP0000159434 Malus domestica MDP0000159434 I 0.682
gene19867-v1.0-hybrid Fragaria vesca gene19867-v1.0-hybrid I 0.682
Eucgr.E04232 Eucalyptus grandis Eucgr.E04232 I 0.682
evm.TU.supercontig_27.185 Carica papaya evm.TU.supercontig_27.185 I 0.682
Pavir.Ba02820 Panicum virgatum Pavir.Ba02820 I 0.682
Pavir.Bb01632 Panicum virgatum Pavir.Bb01632 I 0.682
PDK_20s1369041g001 Phoenix dactylifera PDK_20s1369041g001 I 0.682
PDK_20s1384631g001 Phoenix dactylifera PDK_20s1384631g001 I 0.682
PK10342.1 Cannabis sativa PK10342.1 D 0.682
Thhalv10000981m.g Eutrema salsugineum Thhalv10000981m.g I 0.682
SapurV1A.0089s0170 Salix purpurea SapurV1A.0089s0170 I 0.682
SapurV1A.0220s0460 Salix purpurea SapurV1A.0220s0460 I 0.682
Traes_5BL_A2C97A02D Triticum aestivum Traes_5BL_A2C97A02D I 0.682
Carubv10017769m.g Capsella rubella Carubv10017769m.g I 0.682
mgf002744m Mimulus guttatus mgf002744m I 0.682
mgf003647m Mimulus guttatus mgf003647m I 0.682
Cucsa.044390 Cucumis sativus Cucsa.044390 I 0.682
cassava36261.valid.m1 Manihot esculenta cassava36261.valid.m1 I 0.682
cassava13407.valid.m1 Manihot esculenta cassava13407.valid.m1 I 0.682
cassava36260.valid.m1 Manihot esculenta cassava36260.valid.m1 I 0.682
mgf006394m Mimulus guttatus mgf006394m I 0.682
mgf007291m Mimulus guttatus mgf007291m I 0.682
Bostr.7903s0063 Boechera stricta Bostr.7903s0063 I 0.682
Cagra.2315s0003 Capsella grandiflora Cagra.2315s0003 I 0.682
mgf015945m Mimulus guttatus mgf015945m I 0.682
mgf014369m Mimulus guttatus mgf014369m I 0.682
mgf012689m Mimulus guttatus mgf012689m I 0.682
cassava13406.valid.m1 Manihot esculenta cassava13406.valid.m1 I 0.682
TCM_030480 Theobroma cacao TCM_030480 I 0.682
Bo7g077990 Brassica oleracea Bo7g077990 I 0.682
Bra009228 Brassica rapa Bra009228 I 0.682
Bra024909 Brassica rapa Bra024909 I 0.682
OGLUM09G05280 Oryza glumaepatula OGLUM09G05280 I 0.682
GRMZM2G173943 Zea mays GRMZM2G173943 I 0.682
OPUNC09G03970 Oryza punctata OPUNC09G03970 I 0.682
PHL7 Arabidopsis thaliana AT2G01060 D 0.682
ORUFI09G05110 Oryza rufipogon ORUFI09G05110 I 0.682
ORGLA09G0034900 Oryza glaberrima ORGLA09G0034900 I 0.682
BGIOSGA030474 Oryza indica BGIOSGA030474 I 0.682
Traes_5AL_6F77CFB03 Triticum aestivum Traes_5AL_6F77CFB03 I 0.682
OBART09G04530 Oryza barthii OBART09G04530 I 0.682
MLOC_60074 Hordeum vulgare MLOC_60074 I 0.682
LPERR09G03210 Leersia perrieri LPERR09G03210 I 0.682
GLYMA15G12940 Glycine max GLYMA15G12940 I 0.682
GSMUA_Achr3G28410_001 Musa acuminata GSMUA_Achr3G28410_001 I 0.682
MTR_2g027860 Medicago truncatula MTR_2g027860 I 0.682
GLYMA09G02040 Glycine max GLYMA09G02040 I 0.682
BRADI4G27620 Brachypodium distachyon BRADI4G27620 I 0.682
OB09G12870 Oryza brachyantha OB09G12870 I 0.682
F775_09661 Aegilops tauschii F775_09661 I 0.682
fgenesh2_kg.5__3__AT2G01060.1 Arabidopsis lyrata fgenesh2_kg.5__3__AT2G01060.1 I 0.682
OS09G0299200 Oryza sativa OS09G0299200 I 0.682
ONIVA09G04730 Oryza nivara ONIVA09G04730 I 0.682
Si030592m.g Setaria italica Si030592m.g I 0.682
Solyc11g022470.1 Solanum lycopersicum Solyc11g022470.1 I 0.682
POPTR_0006s00290 Populus trichocarpa POPTR_0006s00290 I 0.682
AMTR_s00061p00095620 Amborella trichopoda AMTR_s00061p00095620 I 0.682
PRUPE_ppa009121mg Prunus persica PRUPE_ppa009121mg I 0.682
Sb02g020700 Sorghum bicolor Sb02g020700 I 0.682
POPTR_0016s00310 Populus trichocarpa POPTR_0016s00310 I 0.682
PGSC0003DMG400008786 Solanum tuberosum PGSC0003DMG400008786 I 0.682
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.682
Solyc11g067280.1 Solanum lycopersicum Solyc11g067280.1 I 0.682
Lus10002483.g Linum usitatissimum Lus10002483.g I 0.681
mgf015795m Mimulus guttatus mgf015795m N 0.681
VIT_13s0156g00370 Vitis vinifera VIT_13s0156g00370 N 0.681
TRIUR3_02291 Triticum urartu TRIUR3_02291 I 0.681
Traes_6BL_5D8EE6802 Triticum aestivum Traes_6BL_5D8EE6802 I 0.681
MTR_7g068600 Medicago truncatula MTR_7g068600 N 0.680
Bo1g138650 Brassica oleracea Bo1g138650 I 0.679
Bra039364 Brassica rapa Bra039364 I 0.679
Bra001484 Brassica rapa Bra001484 I 0.679
Bo3g065290 Brassica oleracea Bo3g065290 I 0.679
Thhalv10020738m.g Eutrema salsugineum Thhalv10020738m.g I 0.679
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.679
mgf007532m Mimulus guttatus mgf007532m N 0.678
mgf007985m Mimulus guttatus mgf007985m N 0.678
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.678
gene18340-v1.0-hybrid Fragaria vesca gene18340-v1.0-hybrid I 0.678
Pm003600 Prunus mume Pm003600 I 0.677
Thhalv10002005m.g Eutrema salsugineum Thhalv10002005m.g I 0.677
PK16227.1 Cannabis sativa PK16227.1 I 0.677
MDP0000132340 Malus domestica MDP0000132340 I 0.677
gene16679-v1.0-hybrid Fragaria vesca gene16679-v1.0-hybrid I 0.677
PRUPE_ppa005708mg Prunus persica PRUPE_ppa005708mg I 0.677
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.677
MDP0000826899 Malus domestica MDP0000826899 I 0.676
GSMUA_Achr4G11370_001 Musa acuminata GSMUA_Achr4G11370_001 I 0.676
OGLUM04G23960 Oryza glumaepatula OGLUM04G23960 I 0.675
OBART04G24010 Oryza barthii OBART04G24010 I 0.675
AMTR_s00131p00063460 Amborella trichopoda AMTR_s00131p00063460 I 0.675
Sb04g003140 Sorghum bicolor Sb04g003140 I 0.675
BGIOSGA017051 Oryza indica BGIOSGA017051 I 0.675
ORGLA04G0205700 Oryza glaberrima ORGLA04G0205700 I 0.675
ORUFI04G25750 Oryza rufipogon ORUFI04G25750 I 0.675
ONIVA04G23170 Oryza nivara ONIVA04G23170 I 0.675
OS04G0600000 Oryza sativa OS04G0600000 I 0.675
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.671
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.671
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.671
Si022099m.g Setaria italica Si022099m.g I 0.671
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.671
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.671
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.671
OB04G35670 Oryza brachyantha OB04G35670 I 0.671
mgf011847m Mimulus guttatus mgf011847m I 0.671
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.671
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.671
OS04G0665600 Oryza sativa OS04G0665600 I 0.671
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.671
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.671
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.671
OBART04G28680 Oryza barthii OBART04G28680 I 0.671
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.671
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.671
VIT_08s0105g00370 Vitis vinifera VIT_08s0105g00370 I 0.668
mgf017208m Mimulus guttatus mgf017208m N 0.668
Thhalv10004351m.g Eutrema salsugineum Thhalv10004351m.g I 0.667
Aquca_004_00369 Aquilegia coerulea Aquca_004_00369 I 0.666
Gorai.010G159700 Gossypium raimondii Gorai.010G159700 I 0.666
Eucgr.D02611 Eucalyptus grandis Eucgr.D02611 I 0.665
BRADI3G22290 Brachypodium distachyon BRADI3G22290 I 0.664
BGIOSGA023251 Oryza indica BGIOSGA023251 I 0.664
BGIOSGA028511 Oryza indica BGIOSGA028511 I 0.664
OGLUM06G21780 Oryza glumaepatula OGLUM06G21780 I 0.664
ORGLA08G0104600 Oryza glaberrima ORGLA08G0104600 I 0.664
estExt_fgenesh1_pg.C_2690029 Physcomitrella patens estExt_fgenesh1_pg.C_2690029 I 0.664
ORGLA06G0171400 Oryza glaberrima ORGLA06G0171400 I 0.664
OPUNC08G10740 Oryza punctata OPUNC08G10740 I 0.664
ONIVA09G02590 Oryza nivara ONIVA09G02590 I 0.664
OPUNC06G18860 Oryza punctata OPUNC06G18860 I 0.664
estExt_fgenesh1_pg.C_2260017 Physcomitrella patens estExt_fgenesh1_pg.C_2260017 I 0.664
ORUFI06G22120 Oryza rufipogon ORUFI06G22120 I 0.664
SELMODRAFT_57477 Selaginella moellendorffii SELMODRAFT_57477 I 0.664
Si014152m.g Setaria italica Si014152m.g I 0.664
SELMODRAFT_47417 Selaginella moellendorffii SELMODRAFT_47417 I 0.664
OS08G0346500 Oryza sativa OS08G0346500 I 0.664
ORUFI08G13040 Oryza rufipogon ORUFI08G13040 I 0.664
OS06G0609500 Oryza sativa OS06G0609500 I 0.664
GSMUA_Achr3G11970_001 Musa acuminata GSMUA_Achr3G11970_001 I 0.664
ONIVA06G24430 Oryza nivara ONIVA06G24430 I 0.664
OB06G28540 Oryza brachyantha OB06G28540 I 0.664
OB08G20230 Oryza brachyantha OB08G20230 I 0.664
Gorai.010G247100 Gossypium raimondii Gorai.010G247100 I 0.664
LPERR08G09750 Leersia perrieri LPERR08G09750 I 0.664
LPERR06G17280 Leersia perrieri LPERR06G17280 I 0.664
OBART06G20690 Oryza barthii OBART06G20690 I 0.664
OBART08G11790 Oryza barthii OBART08G11790 I 0.664
OLONG_023378 Oryza longistaminata OLONG_023378 I 0.664
OMERI06G21260 Oryza meridionalis OMERI06G21260 I 0.664
OLONG_021348 Oryza longistaminata OLONG_021348 I 0.664
OGLUM08G12610 Oryza glumaepatula OGLUM08G12610 I 0.664
Eucgr.D00972 Eucalyptus grandis Eucgr.D00972 I 0.664
GSMUA_Achr7G16840_001 Musa acuminata GSMUA_Achr7G16840_001 I 0.661
evm.TU.contig_34762 Carica papaya evm.TU.contig_34762 I 0.661
Aquca_016_00381 Aquilegia coerulea Aquca_016_00381 I 0.661